iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-091053

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03016016

Gene Name

TSSC1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000011621.5	ENSPTRT00000021659.4	ENSPTRP00000019983.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-16	60.2	225	257

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDlr 31
           H   v++l+f ++   +l+s++dD+++k WD+r
   Q: 225  HGQLVRDLDFnPNkqYYLASCGDDCKVKFWDTR 257
           8999*******555899**************86 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MEDDAPVIYG LEFQARALTP QTAETDAIRF LVGTQSLKYD NQVTIFDKCI HDNIIIKCPP 60
PAGEILYGSA SPADRGVLAF CYNRTSDSKV LTCAAVWRMP KELESGSHES PDDSSSTAQT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGACG ATGCACCAGT GATCTACGGG CTGGAGTTCC AGGTGGGTCA GTGGGAGGGC 60
GGCAGGTGCT GCTCGGCCTG GCTGTTGATA GCATGCGCGG TCCCATGGTG ACTTCGGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001118	Aegilops tauschii	34.27	2.00e-35	142.00
IUUC-Aml-002348	Ailuropoda melanoleuca	94.35	1.00e-123	435.00
IUUC-Atr-003028	Amborella trichopoda	32.45	3.00e-42	165.00
IUUC-Apl-004211	Anas platyrhynchos	78.71	6.00e-170	590.00
IUUC-Aca-004893	Anolis carolinensis	85.64	0.00e+00	639.00
IUUC-Aly-005975	Arabidopsis lyrata	33.69	2.00e-45	176.00
IUUC-Ath-006902	Arabidopsis thaliana	33.07	4.00e-47	181.00
IUUC-Ame-010619	Astyanax mexicanus	80.77	2.00e-179	621.00
IUUC-Bta-013035	Bos taurus	84.24	7.00e-180	622.00
IUUC-Bdi-014619	Brachypodium distachyon	33.94	1.00e-48	186.00
IUUC-Bol-016581	Brassica oleracea	32.98	1.00e-45	176.00
IUUC-Bra-017885	Brassica rapa	33.06	3.00e-46	178.00
IUUC-Cel-018344	Caenorhabditis elegans	34.65	1.00e-51	196.00
IUUC-Cja-018975	Callithrix jacchus	87.44	0.00e+00	639.00
IUUC-Cfa-020214	Canis familiaris	87.95	0.00e+00	640.00
IUUC-Cpo-021363	Cavia porcellus	86.67	3.00e-177	613.00
IUUC-Cre-022554	Chlamydomonas reinhardtii	25.26	5.00e-25	107.00
IUUC-Csa-023240	Chlorocebus sabaeus	93.59	0.00e+00	649.00
IUUC-Cho-024713	Choloepus hoffmanni	83.69	1.00e-174	605.00
IUUC-Cin-025678	Ciona intestinalis	43.56	1.00e-91	330.00
IUUC-Csv-026022	Ciona savignyi	44.36	2.00e-89	322.00
IUUC-Dre-027817	Danio rerio	80.62	0.00e+00	626.00
IUUC-Dno-030097	Dasypus novemcinctus	90.26	0.00e+00	636.00
IUUC-Dme-031866	Drosophila melanogaster	38.36	1.00e-65	243.00
IUUC-Ete-032575	Echinops telfairi	75.30	2.00e-124	438.00
IUUC-Eca-034323	Equus caballus	89.38	3.00e-132	464.00
IUUC-Eeu-035217	Erinaceus europaeus	67.44	2.00e-129	455.00
IUUC-Fca-035709	Felis catus	85.59	1.00e-160	558.00
IUUC-Fal-036989	Ficedula albicollis	85.90	2.00e-180	624.00
IUUC-Gmo-038623	Gadus morhua	67.01	1.00e-145	509.00
IUUC-Gga-040157	Gallus gallus	85.90	0.00e+00	637.00
IUUC-Gac-041368	Gasterosteus aculeatus	55.96	1.00e-105	376.00
IUUC-Gma-044196	Glycine max	31.20	1.00e-43	169.00
IUUC-Ggo-044513	Gorilla gorilla	87.71	0.00e+00	634.00
IUUC-Hsa-046844	Homo sapiens	87.29	0.00e+00	634.00
IUUC-Hvu-047435	Hordeum vulgare	35.01	2.00e-49	189.00
IUUC-Itr-048726	Ictidomys tridecemlineatus	94.43	6.00e-147	512.00
IUUC-Lch-049696	Latimeria chalumnae	83.08	0.00e+00	627.00
IUUC-Lpe-050988	Leersia perrieri	33.11	1.00e-35	143.00
IUUC-Loc-052440	Lepisosteus oculatus	82.35	4.00e-180	624.00
IUUC-Laf-054088	Loxodonta africana	89.49	0.00e+00	628.00
IUUC-Mcc-055575	Macaca mulatta	86.51	2.00e-175	608.00
IUUC-Meu-056807	Macropus eugenii	64.03	4.00e-130	457.00
IUUC-Mtr-058599	Medicago truncatula	31.54	1.00e-44	173.00
IUUC-Mga-059336	Meleagris gallopavo	84.75	1.00e-171	595.00
IUUC-Mmr-061706	Microcebus murinus	90.26	0.00e+00	667.00
IUUC-Mdo-062736	Monodelphis domestica	87.44	5.00e-178	616.00
IUUC-Mmu-064265	Mus musculus	86.92	0.00e+00	672.00
IUUC-Mac-065342	Musa acuminata	32.56	2.00e-45	175.00
IUUC-Mpu-066514	Mustela putorius furo	87.86	0.00e+00	640.00
IUUC-Mlu-067072	Myotis lucifugus	91.88	6.00e-104	369.00
IUUC-Nle-069307	Nomascus leucogenys	83.93	6.00e-172	596.00
IUUC-Opr-070283	Ochotona princeps	67.44	4.00e-134	470.00
IUUC-Ont-072532	Oreochromis niloticus	76.67	1.00e-171	595.00
IUUC-Oan-073222	Ornithorhynchus anatinus	84.81	9.00e-173	598.00
IUUC-Oba-075849	Oryza barthii	33.79	3.00e-36	145.00
IUUC-Obr-076488	Oryza brachyantha	32.00	3.00e-40	159.00
IUUC-Ogl-077928	Oryza glaberrima	34.92	7.00e-39	154.00
IUUC-Ogu-077997	Oryza glumaepatula	33.79	2.00e-36	146.00
IUUC-Oin-079848	Oryza indica	34.58	2.00e-38	152.00
IUUC-Oni-082492	Oryza nivara	33.79	2.00e-36	146.00
IUUC-Oru-085119	Oryza rufipogon	33.79	2.00e-36	146.00
IUUC-Osa-086152	Oryza sativa	34.58	6.00e-39	154.00
IUUC-Ola-086694	Oryzias latipes	68.25	4.00e-165	573.00
IUUC-Olu-087749	Ostreococcus lucimarinus	33.82	3.00e-24	104.00
IUUC-Oga-088180	Otolemur garnettii	97.00	1.00e-149	522.00
IUUC-Oar-089621	Ovis aries	65.56	2.00e-116	411.00
IUUC-Pan-091918	Papio anubis	93.08	0.00e+00	645.00
IUUC-Psi-093545	Pelodiscus sinensis	86.15	4.00e-179	620.00
IUUC-Pma-094439	Petromyzon marinus	71.50	8.00e-154	536.00
IUUC-Pfo-096127	Poecilia formosa	77.95	1.00e-175	608.00
IUUC-Pab-097916	Pongo abelii	88.62	0.00e+00	638.00
IUUC-Pop-098864	Populus trichocarpa	31.82	3.00e-43	169.00
IUUC-Pca-100797	Procavia capensis	82.59	1.00e-123	436.00
IUUC-Ppe-101796	Prunus persica	32.71	4.00e-47	181.00
IUUC-Pva-103228	Pteropus vampyrus	77.46	3.00e-172	597.00
IUUC-Rno-104877	Rattus norvegicus	86.92	0.00e+00	637.00
IUUC-Sha-106940	Sarcophilus harrisii	87.21	0.00e+00	645.00
IUUC-Smo-109355	Selaginella moellendorffii	32.63	7.00e-50	191.00
IUUC-Sit-109958	Setaria italica	34.04	4.00e-49	188.00
IUUC-Sly-111871	Solanum lycopersicum	31.12	2.00e-42	166.00
IUUC-Stu-112128	Solanum tuberosum	30.73	1.00e-40	159.00
IUUC-Sar-113084	Sorex araneus	71.08	2.00e-108	385.00
IUUC-Sbi-114122	Sorghum bicolor	33.85	8.00e-49	187.00
IUUC-Ssc-115385	Sus scrofa	81.79	2.00e-174	605.00
IUUC-Tgu-117090	Taeniopygia guttata	83.51	1.00e-172	598.00
IUUC-Tru-118548	Takifugu rubripes	68.96	2.00e-168	585.00
IUUC-Tsy-119435	Tarsius syrichta	85.37	1.00e-173	602.00
IUUC-Tni-120311	Tetraodon nigroviridis	67.10	6.00e-141	493.00
IUUC-Tca-121141	Theobroma cacao	32.17	4.00e-42	165.00
IUUC-Tae-122717	Triticum aestivum	35.01	2.00e-49	189.00
IUUC-Tbe-127623	Tupaia belangeri	59.84	6.00e-99	353.00
IUUC-Ttr-128706	Tursiops truncatus	70.77	2.00e-146	511.00
IUUC-Vvi-130871	Vitis vinifera	32.71	2.00e-40	159.00
IUUC-Xtr-131950	Xenopus tropicalis	83.20	6.00e-180	623.00
IUUC-Xma-133364	Xiphophorus maculatus	77.69	3.00e-174	604.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence