iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-22	77.3	324	355

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf....sd.tllvsGsdDgtikvWDl 30
            ++ claf     d +l+++Gs Dg i +WD+
   Q: 324  HGIECLAFapssADlKLFACGSLDGRISIWDY 355
           6799*****98777899**************6 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MRDNTPPHRP DFDDGDDELQ EIIELEEQPL DEDDDDLEEV TLEQLEARLA MAGGDDDEEE 60
DEEELRDRER IAAITDEATV TFKKHTAPVF ACSLHPNYNW AVTGSEDDRA FVWETSTGDV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGTTGCCAG ACCATTGATT TTCTAGCACG TGTGATACAT TCATTTAATT GTTATTTTTA 60
TGCAGCTTAA CTTGCTATTT GGACCATTAA GAGAATAGGA ATGCGTGACA ACACACCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030687--C:preribosome, large subunit precursor
GO:0051082--F:unfolded protein binding
GO:0042273--P:ribosomal large subunit biogenesis

KEGG

dme:Dmel_CG5114

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001781	Ailuropoda melanoleuca	31.98	2.00e-45	176.00
IUUC-Atr-003169	Amborella trichopoda	25.20	1.00e-26	113.00
IUUC-Apl-003939	Anas platyrhynchos	22.75	4.00e-16	77.80
IUUC-Aca-004594	Anolis carolinensis	31.25	6.00e-49	187.00
IUUC-Aly-006277	Arabidopsis lyrata	24.86	1.00e-29	123.00
IUUC-Ath-007701	Arabidopsis thaliana	26.72	1.00e-31	129.00
IUUC-Ago-007790	Ashbya gossypii	23.43	5.00e-15	74.70
IUUC-Ame-011651	Astyanax mexicanus	31.68	1.00e-50	193.00
IUUC-Bta-012833	Bos taurus	31.02	1.00e-45	176.00
IUUC-Bdi-014289	Brachypodium distachyon	26.54	1.00e-31	129.00
IUUC-Bol-015313	Brassica oleracea	26.72	2.00e-32	132.00
IUUC-Bra-017115	Brassica rapa	25.00	6.00e-28	117.00
IUUC-Cel-018305	Caenorhabditis elegans	24.81	2.00e-24	105.00
IUUC-Cja-019433	Callithrix jacchus	31.55	4.00e-46	177.00
IUUC-Cfa-020093	Canis familiaris	31.02	2.00e-45	175.00
IUUC-Cpo-021742	Cavia porcellus	31.28	9.00e-46	176.00
IUUC-Csa-023498	Chlorocebus sabaeus	31.98	3.00e-46	178.00
IUUC-Cho-024628	Choloepus hoffmanni	31.44	2.00e-36	145.00
IUUC-Cin-025244	Ciona intestinalis	28.69	9.00e-42	163.00
IUUC-Csv-026218	Ciona savignyi	32.05	3.00e-44	171.00
IUUC-Cne-026826	Cryptococcus neoformans	23.80	8.00e-17	80.90
IUUC-Dre-028528	Danio rerio	31.61	7.00e-44	170.00
IUUC-Dno-029297	Dasypus novemcinctus	31.02	9.00e-46	176.00
IUUC-Dor-030543	Dipodomys ordii	39.29	3.00e-15	74.70
IUUC-Ete-033100	Echinops telfairi	40.88	2.00e-33	135.00
IUUC-Eca-034277	Equus caballus	31.44	9.00e-46	176.00
IUUC-Fca-036115	Felis catus	31.02	3.00e-45	174.00
IUUC-Fal-036864	Ficedula albicollis	31.37	5.00e-50	190.00
IUUC-Gmo-039090	Gadus morhua	44.38	6.00e-37	147.00
IUUC-Gga-040545	Gallus gallus	31.00	6.00e-49	187.00
IUUC-Gac-042027	Gasterosteus aculeatus	32.34	9.00e-50	190.00
IUUC-Ggo-045036	Gorilla gorilla	31.28	5.00e-46	177.00
IUUC-Hsa-046749	Homo sapiens	31.28	5.00e-46	177.00
IUUC-Hvu-047247	Hordeum vulgare	25.07	5.00e-30	124.00
IUUC-Itr-048114	Ictidomys tridecemlineatus	31.02	1.00e-45	176.00
IUUC-Kpa-049147	Komagataella pastoris	23.95	1.00e-18	87.00
IUUC-Lch-049747	Latimeria chalumnae	28.61	9.00e-38	150.00
IUUC-Loc-052406	Lepisosteus oculatus	32.17	3.00e-47	181.00
IUUC-Laf-053901	Loxodonta africana	31.02	2.00e-45	176.00
IUUC-Mcc-054990	Macaca mulatta	31.28	4.00e-46	177.00
IUUC-Meu-056844	Macropus eugenii	31.47	1.00e-46	179.00
IUUC-Mla-058856	Melampsora laricipopulina	23.12	4.00e-19	88.60
IUUC-Mga-059749	Meleagris gallopavo	31.20	2.00e-48	185.00
IUUC-Mvi-060237	Microbotryum violaceum	24.47	1.00e-23	103.00
IUUC-Mmr-061270	Microcebus murinus	30.10	2.00e-42	166.00
IUUC-Mdo-062965	Monodelphis domestica	31.20	1.00e-45	176.00
IUUC-Mmu-064081	Mus musculus	30.75	4.00e-45	174.00
IUUC-Mpu-066355	Mustela putorius furo	31.02	2.00e-45	175.00
IUUC-Mlu-067630	Myotis lucifugus	32.16	3.00e-45	175.00
IUUC-Nle-069701	Nomascus leucogenys	31.28	6.00e-46	177.00
IUUC-Opr-070337	Ochotona princeps	27.54	2.00e-33	135.00
IUUC-Ont-072614	Oreochromis niloticus	32.79	1.00e-49	189.00
IUUC-Ocu-073912	Oryctolagus cuniculus	31.28	6.00e-46	177.00
IUUC-Ola-087164	Oryzias latipes	32.69	9.00e-49	186.00
IUUC-Oga-088864	Otolemur garnettii	31.02	1.00e-45	176.00
IUUC-Oar-090115	Ovis aries	31.02	1.00e-45	176.00
IUUC-Ptr-091398	Pan troglodytes	31.28	5.00e-46	177.00
IUUC-Pan-092002	Papio anubis	31.28	6.00e-46	177.00
IUUC-Psi-093979	Pelodiscus sinensis	45.93	1.00e-41	161.00
IUUC-Pma-094618	Petromyzon marinus	30.97	3.00e-47	181.00
IUUC-Ppa-095351	Physcomitrella patens	27.91	1.00e-33	136.00
IUUC-Pfo-097078	Poecilia formosa	33.06	2.00e-50	192.00
IUUC-Pab-098540	Pongo abelii	31.28	6.00e-46	177.00
IUUC-Pca-101072	Procavia capensis	30.19	1.00e-40	160.00
IUUC-Ppe-101979	Prunus persica	25.14	2.00e-30	125.00
IUUC-Pva-102400	Pteropus vampyrus	26.47	2.00e-32	132.00
IUUC-Pgr-103362	Puccinia graminis	25.86	6.00e-28	117.00
IUUC-Ptt-103756	Puccinia triticina	31.75	2.00e-25	109.00
IUUC-Rno-105672	Rattus norvegicus	31.02	2.00e-45	176.00
IUUC-Sce-106242	Saccharomyces cerevisiae	21.09	4.00e-16	78.60
IUUC-Sja-107693	Schizosaccharomyces japonicus	25.66	2.00e-25	109.00
IUUC-Spo-108208	Schizosaccharomyces pombe	25.20	1.00e-24	106.00
IUUC-Smo-109168	Selaginella moellendorffii	29.23	2.00e-32	132.00
IUUC-Sre-115029	Sporisorium reilianum	26.67	1.00e-23	103.00
IUUC-Ssc-115726	Sus scrofa	41.04	6.00e-37	146.00
IUUC-Tgu-117514	Taeniopygia guttata	31.00	2.00e-49	189.00
IUUC-Tru-117851	Takifugu rubripes	32.79	2.00e-49	189.00
IUUC-Tsy-119140	Tarsius syrichta	30.82	1.00e-37	149.00
IUUC-Tni-120248	Tetraodon nigroviridis	33.15	1.00e-49	189.00
IUUC-Tme-127079	Tuber melanosporum	25.00	4.00e-10	58.50
IUUC-Ttr-128182	Tursiops truncatus	31.02	1.00e-45	176.00
IUUC-Uma-129624	Ustilago maydis	25.80	3.00e-25	108.00
IUUC-Vpa-130605	Vicugna pacos	27.30	9.00e-28	116.00
IUUC-Xtr-132193	Xenopus tropicalis	31.75	1.00e-49	189.00
IUUC-Xma-133880	Xiphophorus maculatus	33.33	1.00e-50	192.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence