iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Post-translational Modifications (PTMs)
dbPAF	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	38.46	4.00e-37	156.00	IUUC-Hsa-047032
E3 activity/RING/PHD	38.46	4.00e-37	156.00	IUUC-Hsa-047032

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MSDRDSDAVS DAGPRLSQQR GQRNRRIIMR IEFKDSEDSA SDQDRDDRPS CSAATRLRRS 60
TRRQEVASHS DSDSVPRKST RKLRNRYGPR SDCSSSGSDI DQLPTRTRKR KKVESSDEEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAATCGTCTG TGGCACAAAA ATATCGAAAG CGCTCGCTGA CGTTAACCCA CCTCTAGCTG 60
AAAAAATGGC TGAAATCCAA GTGTGTGTGT AAAGGAAACT GTGTGTGAAA AATTTGAGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR015970--P40_nucleoprot_sub2_BD-vir
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00628--PHD
PF13639--zf-RING_2

SMART

SM00249--PHD
SM00184--RING

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0000381--P:regulation of alternative mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001707	Ailuropoda melanoleuca	39.71	4.00e-40	160.00
IUUC-Apl-003929	Anas platyrhynchos	31.65	2.00e-24	108.00
IUUC-Aca-004929	Anolis carolinensis	39.53	2.00e-40	161.00
IUUC-Acl-008371	Aspergillus clavatus	30.00	8.00e-13	67.80
IUUC-Afu-008965	Aspergillus fumigatus	32.09	5.00e-14	72.00
IUUC-Ani-009406	Aspergillus nidulans	33.07	2.00e-13	70.50
IUUC-Ame-010920	Astyanax mexicanus	41.22	9.00e-37	149.00
IUUC-Bgr-012184	Blumeria graminis	25.38	2.00e-13	70.10
IUUC-Bci-013863	Botrytis cinerea	30.77	8.00e-15	74.70
IUUC-Bdi-014588	Brachypodium distachyon	29.58	5.00e-13	69.70
IUUC-Cja-019443	Callithrix jacchus	35.94	2.00e-29	124.00
IUUC-Cfa-021078	Canis familiaris	38.28	2.00e-38	154.00
IUUC-Cpo-022518	Cavia porcellus	36.92	2.00e-37	150.00
IUUC-Csa-024020	Chlorocebus sabaeus	39.44	2.00e-41	164.00
IUUC-Cho-024396	Choloepus hoffmanni	39.22	4.00e-11	63.50
IUUC-Cin-025408	Ciona intestinalis	41.61	3.00e-32	132.00
IUUC-Csv-026207	Ciona savignyi	39.86	3.00e-32	130.00
IUUC-Cgl-026545	Colletotrichum gloeosporioides	34.56	1.00e-16	80.90
IUUC-Dre-028443	Danio rerio	43.92	1.00e-36	149.00
IUUC-Dno-029298	Dasypus novemcinctus	39.23	4.00e-39	156.00
IUUC-Dse-031210	Dothistroma septosporum	28.91	3.00e-10	59.30
IUUC-Eca-033870	Equus caballus	36.65	1.00e-34	141.00
IUUC-Fca-036396	Felis catus	37.32	4.00e-39	156.00
IUUC-Fal-037446	Ficedula albicollis	38.60	5.00e-39	156.00
IUUC-Fox-037887	Fusarium oxysporum	37.70	4.00e-15	75.90
IUUC-Fso-038253	Fusarium solani	37.50	5.00e-16	79.00
IUUC-Gmo-039170	Gadus morhua	43.51	2.00e-36	147.00
IUUC-Ggr-039838	Gaeumannomyces graminis	34.68	7.00e-15	75.10
IUUC-Gga-040178	Gallus gallus	37.96	1.00e-41	165.00
IUUC-Gac-042138	Gasterosteus aculeatus	38.18	2.00e-39	158.00
IUUC-Gma-043193	Glycine max	28.38	1.00e-14	74.30
IUUC-Ggo-045239	Gorilla gorilla	38.86	5.00e-40	159.00
IUUC-Hsa-047032	Homo sapiens	43.15	7.00e-38	152.00
IUUC-Hvu-047154	Hordeum vulgare	28.57	3.00e-13	69.70
IUUC-Itr-048665	Ictidomys tridecemlineatus	39.34	1.00e-41	165.00
IUUC-Kpa-049155	Komagataella pastoris	27.64	2.00e-07	49.30
IUUC-Lch-049602	Latimeria chalumnae	36.53	7.00e-34	139.00
IUUC-Loc-052887	Lepisosteus oculatus	41.04	1.00e-41	165.00
IUUC-Laf-054317	Loxodonta africana	39.52	1.00e-38	153.00
IUUC-Mcc-055760	Macaca mulatta	39.44	2.00e-41	164.00
IUUC-Meu-056741	Macropus eugenii	43.38	3.00e-34	140.00
IUUC-Mga-059236	Meleagris gallopavo	38.43	3.00e-41	164.00
IUUC-Mmr-060938	Microcebus murinus	38.03	2.00e-39	158.00
IUUC-Mdo-061937	Monodelphis domestica	37.05	3.00e-38	153.00
IUUC-Mmu-063932	Mus musculus	41.28	1.00e-41	165.00
IUUC-Mac-065474	Musa acuminata	27.97	5.00e-12	65.90
IUUC-Mpu-066615	Mustela putorius furo	39.15	2.00e-39	157.00
IUUC-Mlu-067670	Myotis lucifugus	38.89	8.00e-40	159.00
IUUC-Nfi-068246	Neosartorya fischeri	31.34	4.00e-13	68.90
IUUC-Ncr-068647	Neurospora crassa	29.50	9.00e-16	77.80
IUUC-Nle-069562	Nomascus leucogenys	43.84	2.00e-38	154.00
IUUC-Ont-072073	Oreochromis niloticus	38.16	5.00e-36	146.00
IUUC-Ocu-073818	Oryctolagus cuniculus	41.61	1.00e-35	145.00
IUUC-Oba-075127	Oryza barthii	28.57	3.00e-13	69.70
IUUC-Oin-079478	Oryza indica	29.79	4.00e-11	62.00
IUUC-Ome-081535	Oryza meridionalis	28.57	3.00e-13	70.50
IUUC-Oar-090046	Ovis aries	35.58	2.00e-30	128.00
IUUC-Ptr-091344	Pan troglodytes	38.97	9.00e-40	159.00
IUUC-Pan-091953	Papio anubis	43.84	1.00e-38	155.00
IUUC-Psi-093027	Pelodiscus sinensis	38.53	3.00e-38	154.00
IUUC-Pma-094431	Petromyzon marinus	43.24	5.00e-33	134.00
IUUC-Pfo-096523	Poecilia formosa	40.95	1.00e-41	165.00
IUUC-Pca-100725	Procavia capensis	40.65	2.00e-41	164.00
IUUC-Pva-102835	Pteropus vampyrus	42.28	3.00e-36	147.00
IUUC-Rno-106007	Rattus norvegicus	39.91	5.00e-40	159.00
IUUC-Sja-107848	Schizosaccharomyces japonicus	29.19	1.00e-14	73.90
IUUC-Spo-108141	Schizosaccharomyces pombe	31.20	1.00e-12	67.40
IUUC-Smo-109166	Selaginella moellendorffii	48.08	2.00e-11	63.90
IUUC-Sit-110177	Setaria italica	28.67	4.00e-13	69.30
IUUC-Ssc-115487	Sus scrofa	39.05	7.00e-37	149.00
IUUC-Tgu-116964	Taeniopygia guttata	53.41	1.00e-23	105.00
IUUC-Tru-117543	Takifugu rubripes	38.12	4.00e-38	153.00
IUUC-Tni-119922	Tetraodon nigroviridis	38.16	1.00e-36	148.00
IUUC-Tre-121933	Trichoderma reesei	36.67	5.00e-16	78.60
IUUC-Tvi-122509	Trichoderma virens	33.61	5.00e-16	79.00
IUUC-Tae-123262	Triticum aestivum	29.93	2.00e-13	70.90
IUUC-Tur-126349	Triticum urartu	29.93	1.00e-13	71.20
IUUC-Ttr-129201	Tursiops truncatus	36.06	4.00e-37	150.00
IUUC-Vda-129876	Verticillium dahliae	34.65	9.00e-16	77.80
IUUC-Xtr-131759	Xenopus tropicalis	40.47	1.00e-39	158.00
IUUC-Xma-133123	Xiphophorus maculatus	40.28	6.00e-40	159.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence