iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d031058	Zm00001d031058_T001	Zm00001d031058_T001
Zm00001d031058	Zm00001d031058_T010	Zm00001d031058_T010
Zm00001d031058	Zm00001d031058_T003	Zm00001d031058_T003
Zm00001d031058	Zm00001d031058_T004	Zm00001d031058_T004

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.30e-07	33.2	234	276

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCled+   ++ ++vlpC H fha C+  w     ++s +  CP+C+
   Q: 234  CAICLEDYsvgEK-LRVLPCRHKFHAACVDLW-----LTSWRTFCPVCK 276
           ********99555.******************.....5555666****6 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MKSRFLVLCA IVCVMAQMGD ANVVLLGNNL TLSFADIEAS FSPGVKGSGV NGIVYASEPL 60
NACSPLTIKA VKGPPSPFAL IVRGGCTFDE KVKNAQDAGF KAAIVYDNEN SGVLVSIVAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCGGCGACA AAAACGAAAA GCGACTTGCC CTCCGCGGCC TCCGGCCTTC CCACTCCACT 60
CGCCCTCCTC TCCTAGCGTC GGTGAGCCGG TGCGCTGCAG TCCCCGCTCC CCTTCCGCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0675--Receptor
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF02225--PA
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000889	Aegilops tauschii	84.80	1.00e-107	383.00
IUUC-Atr-003055	Amborella trichopoda	68.04	4.00e-112	397.00
IUUC-Bci-013936	Botrytis cinerea	52.17	1.00e-13	70.90
IUUC-Bdi-014560	Brachypodium distachyon	74.90	4.00e-157	547.00
IUUC-Cre-022631	Chlamydomonas reinhardtii	31.47	3.00e-29	122.00
IUUC-Cin-025554	Ciona intestinalis	34.35	4.00e-33	134.00
IUUC-Csv-025959	Ciona savignyi	32.57	6.00e-30	124.00
IUUC-Cne-027033	Cryptococcus neoformans	37.50	1.00e-12	67.80
IUUC-Dse-031214	Dothistroma septosporum	43.33	6.00e-12	65.50
IUUC-Dme-031765	Drosophila melanogaster	32.50	2.00e-29	122.00
IUUC-Gma-043776	Glycine max	72.66	2.00e-116	412.00
IUUC-Hvu-047205	Hordeum vulgare	73.11	4.00e-164	570.00
IUUC-Lpe-051192	Leersia perrieri	72.96	3.00e-163	567.00
IUUC-Mor-056917	Magnaporthe oryzae	55.56	6.00e-13	68.60
IUUC-Mac-065216	Musa acuminata	64.86	3.00e-125	441.00
IUUC-Opr-070767	Ochotona princeps	26.46	8.00e-20	90.50
IUUC-Oba-075841	Oryza barthii	74.25	2.00e-160	558.00
IUUC-Obr-076703	Oryza brachyantha	74.26	6.00e-169	586.00
IUUC-Ogl-077861	Oryza glaberrima	74.01	6.00e-170	590.00
IUUC-Ogu-078205	Oryza glumaepatula	73.60	1.00e-160	558.00
IUUC-Olo-081024	Oryza longistaminata	72.52	2.00e-162	565.00
IUUC-Ome-081844	Oryza meridionalis	71.89	4.00e-159	553.00
IUUC-Oni-082382	Oryza nivara	74.00	8.00e-175	606.00
IUUC-Opu-083162	Oryza punctata	74.13	6.00e-176	609.00
IUUC-Oru-085099	Oryza rufipogon	71.93	9.00e-164	569.00
IUUC-Osa-086175	Oryza sativa	72.31	3.00e-168	584.00
IUUC-Spo-108083	Schizosaccharomyces pombe	27.68	2.00e-17	82.80
IUUC-Sit-110044	Setaria italica	84.80	0.00e+00	626.00
IUUC-Sbi-114409	Sorghum bicolor	83.48	0.00e+00	677.00
IUUC-Sre-114989	Sporisorium reilianum	42.11	3.00e-14	73.90
IUUC-Tae-125365	Triticum aestivum	72.53	4.00e-150	524.00
IUUC-Tur-126455	Triticum urartu	75.24	4.00e-150	523.00
IUUC-Uma-129467	Ustilago maydis	47.46	3.00e-12	67.40
IUUC-Vda-129899	Verticillium dahliae	53.33	4.00e-13	69.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence