iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095720

Ensembl Protein ID

PP1S207_37V6.1

UniProt Accession

A9TD32; A9TD32_PHYPA

Genbank Protein ID

EDQ58674.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545096

Gene Name

PHYPADRAFT_169389

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S207_37V6	PP1S207_37V6.1	PP1S207_37V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.40e-33	112.1	558	589
UBD/Beta-Prp	2.50e-59	201.6	198	360

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH+d++t+++f  d +ll+s+s D t++vWD+
   Q: 558  GHSDRITDICFsEDgKLLLSSSMDFTVRVWDV 589
           8**********9556****************8 PP

UBD/Beta-Prp

   S: 24   llatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgk.ilvtgseDrtikvwdlstgkcvhtlk.ghedsvlslsfspsgdklvsGshd 115
           ++ +g+++g+i v++++   ++ ++    +++vta++f  dg+ +l+ + + ++i +w+l+++k   +++ +h+++++sl+f +   +l+s+++d
   Q: 198  IVGVGCANGKIYVHNLRYDETVVTFsHTGKGAVTALSFRTDGQpFLAAAVSTGVISIWNLEKRKLQAVVEdAHSSEIRSLQFLAGEPVLLSAGAD 292
           5678*********************7788999**********99*********************9999989************99********* PP
   S: 116  rtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgght 180
           + +++w  +t         + +gh++  +c+++ + gn + s++ Dr+ r+++  +++  r+l++gh 
   Q: 293  NSLKMWIFDTSDGEGRllrFRNGHSAPPTCIKYYGRGNHILSAGQDRAFRVFSTIQDQQSRELSQGHI 360
           *****87776554444445***********************************99999999987785 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MVGMFEPFRA LGYITDATPF SVQRRGAENF VTVSVGNSFQ VLNCAKLTLV LVGPQLPKRI 60
QALVSLRDFT YVASGFDIVV FKRAHQVARW SAHTSKVTLL LEFGQQILSI DAGGRLCVWK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGGGCA TGTTTGAGCC CTTTCGGGCT CTTGGCTACA TCACGGATGC CACACCTTTT 60
TCCGTGCAAC GGAGAGGAGC TGAGAATTTC GTCACCGTCA GTGTCGGCAA CTCATTCCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR002469--Peptidase_S9B_N
IPR027295--Quinoprotein_ADH-like_fam
IPR011047--Quinoprotein_ADH-like_supfam
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

KEGG

ppp:PHYPADRAFT_169389

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001096	Aegilops tauschii	52.63	0.00e+00	959.00
IUUC-Aml-002289	Ailuropoda melanoleuca	35.31	9.00e-150	523.00
IUUC-Atr-002859	Amborella trichopoda	53.69	0.00e+00	893.00
IUUC-Apl-003505	Anas platyrhynchos	36.27	2.00e-140	492.00
IUUC-Aca-004339	Anolis carolinensis	34.77	1.00e-148	520.00
IUUC-Aly-005913	Arabidopsis lyrata	53.26	0.00e+00	964.00
IUUC-Ath-006767	Arabidopsis thaliana	53.09	0.00e+00	966.00
IUUC-Ago-007763	Ashbya gossypii	29.10	4.00e-99	355.00
IUUC-Acl-008275	Aspergillus clavatus	30.45	1.00e-76	280.00
IUUC-Afl-008457	Aspergillus flavus	28.83	2.00e-65	242.00
IUUC-Afu-008914	Aspergillus fumigatus	27.53	2.00e-73	270.00
IUUC-Ani-009225	Aspergillus nidulans	30.66	1.00e-85	310.00
IUUC-Aor-010046	Aspergillus oryzae	28.56	1.00e-91	330.00
IUUC-Ate-010337	Aspergillus terreus	27.34	1.00e-85	310.00
IUUC-Ame-010963	Astyanax mexicanus	35.67	2.00e-147	516.00
IUUC-Bgr-011973	Blumeria graminis	27.41	7.00e-96	344.00
IUUC-Bta-012462	Bos taurus	36.56	1.00e-151	529.00
IUUC-Bci-013940	Botrytis cinerea	28.67	4.00e-105	375.00
IUUC-Bdi-014725	Brachypodium distachyon	53.21	0.00e+00	975.00
IUUC-Bol-016534	Brassica oleracea	54.89	0.00e+00	983.00
IUUC-Bra-016781	Brassica rapa	53.37	0.00e+00	950.00
IUUC-Cel-018581	Caenorhabditis elegans	25.75	2.00e-73	270.00
IUUC-Cja-019675	Callithrix jacchus	34.67	1.00e-155	543.00
IUUC-Cfa-020118	Canis familiaris	35.05	2.00e-148	519.00
IUUC-Cpo-021798	Cavia porcellus	35.02	5.00e-146	511.00
IUUC-Cre-022566	Chlamydomonas reinhardtii	33.16	1.00e-45	177.00
IUUC-Csa-023547	Chlorocebus sabaeus	35.21	4.00e-147	514.00
IUUC-Cho-024518	Choloepus hoffmanni	30.88	2.00e-96	346.00
IUUC-Cin-025339	Ciona intestinalis	31.26	1.00e-139	489.00
IUUC-Cgl-026476	Colletotrichum gloeosporioides	28.74	2.00e-92	333.00
IUUC-Cne-026859	Cryptococcus neoformans	32.79	4.00e-131	461.00
IUUC-Cme-027173	Cyanidioschyzon merolae	28.46	2.00e-82	300.00
IUUC-Dre-027733	Danio rerio	34.52	2.00e-143	502.00
IUUC-Dno-029439	Dasypus novemcinctus	35.24	3.00e-145	508.00
IUUC-Dor-030329	Dipodomys ordii	33.20	2.00e-61	229.00
IUUC-Dse-031511	Dothistroma septosporum	27.54	1.00e-84	307.00
IUUC-Dme-031694	Drosophila melanogaster	34.38	9.00e-135	473.00
IUUC-Ete-032930	Echinops telfairi	34.64	3.00e-125	442.00
IUUC-Eca-033302	Equus caballus	35.17	9.00e-148	516.00
IUUC-Eeu-034516	Erinaceus europaeus	34.16	1.00e-153	536.00
IUUC-Fca-036064	Felis catus	35.67	8.00e-150	523.00
IUUC-Fal-037024	Ficedula albicollis	35.95	5.00e-156	544.00
IUUC-Fox-037787	Fusarium oxysporum	27.80	3.00e-81	296.00
IUUC-Fso-038378	Fusarium solani	28.15	1.00e-84	307.00
IUUC-Gmo-039637	Gadus morhua	37.20	2.00e-83	302.00
IUUC-Ggr-040108	Gaeumannomyces graminis	28.15	3.00e-89	323.00
IUUC-Gga-040982	Gallus gallus	34.91	4.00e-159	554.00
IUUC-Gac-041565	Gasterosteus aculeatus	34.96	4.00e-133	468.00
IUUC-Gma-043414	Glycine max	55.64	0.00e+00	999.00
IUUC-Ggo-045463	Gorilla gorilla	34.77	7.00e-148	517.00
IUUC-Hsa-045675	Homo sapiens	34.84	7.00e-150	524.00
IUUC-Hvu-047352	Hordeum vulgare	52.49	0.00e+00	879.00
IUUC-Itr-048088	Ictidomys tridecemlineatus	34.70	5.00e-157	547.00
IUUC-Kpa-049164	Komagataella pastoris	28.96	8.00e-101	360.00
IUUC-Lch-050476	Latimeria chalumnae	34.66	3.00e-152	531.00
IUUC-Lpe-051556	Leersia perrieri	47.22	0.00e+00	644.00
IUUC-Loc-052820	Lepisosteus oculatus	34.73	4.00e-149	521.00
IUUC-Lma-052961	Leptosphaeria maculans	28.45	3.00e-83	302.00
IUUC-Laf-054006	Loxodonta africana	34.62	5.00e-141	494.00
IUUC-Mcc-055037	Macaca mulatta	35.06	6.00e-149	521.00
IUUC-Mor-057280	Magnaporthe oryzae	28.26	3.00e-88	319.00
IUUC-Mpo-057408	Magnaporthe poae	28.44	5.00e-86	311.00
IUUC-Mtr-058473	Medicago truncatula	55.18	0.00e+00	998.00
IUUC-Mla-058892	Melampsora laricipopulina	32.11	3.00e-106	379.00
IUUC-Mga-059598	Meleagris gallopavo	31.03	2.00e-109	389.00
IUUC-Mvi-060334	Microbotryum violaceum	30.76	1.00e-107	383.00
IUUC-Mmr-061239	Microcebus murinus	34.49	4.00e-148	518.00
IUUC-Mdo-062471	Monodelphis domestica	36.34	2.00e-147	516.00
IUUC-Mmu-063872	Mus musculus	34.52	9.00e-156	543.00
IUUC-Mac-064631	Musa acuminata	52.87	0.00e+00	866.00
IUUC-Mpu-066039	Mustela putorius furo	35.70	2.00e-160	559.00
IUUC-Mlu-067485	Myotis lucifugus	35.13	9.00e-149	520.00
IUUC-Nfi-068319	Neosartorya fischeri	27.75	4.00e-86	312.00
IUUC-Ncr-068725	Neurospora crassa	29.26	1.00e-92	333.00
IUUC-Nle-069050	Nomascus leucogenys	35.17	3.00e-150	525.00
IUUC-Opr-070437	Ochotona princeps	41.98	5.00e-48	185.00
IUUC-Ont-071574	Oreochromis niloticus	34.96	1.00e-140	493.00
IUUC-Oan-072826	Ornithorhynchus anatinus	35.77	1.00e-156	546.00
IUUC-Ocu-073995	Oryctolagus cuniculus	35.03	4.00e-143	501.00
IUUC-Oba-075407	Oryza barthii	46.25	0.00e+00	794.00
IUUC-Obr-076451	Oryza brachyantha	53.25	0.00e+00	993.00
IUUC-Ogl-077535	Oryza glaberrima	52.92	0.00e+00	975.00
IUUC-Ogu-077995	Oryza glumaepatula	45.62	0.00e+00	788.00
IUUC-Oin-079431	Oryza indica	53.09	0.00e+00	980.00
IUUC-Olo-080495	Oryza longistaminata	46.50	0.00e+00	782.00
IUUC-Oni-082336	Oryza nivara	51.08	0.00e+00	925.00
IUUC-Opu-084028	Oryza punctata	48.39	0.00e+00	830.00
IUUC-Oru-084500	Oryza rufipogon	45.56	0.00e+00	786.00
IUUC-Osa-086242	Oryza sativa	53.20	0.00e+00	983.00
IUUC-Ola-086612	Oryzias latipes	33.61	2.00e-112	399.00
IUUC-Olu-087703	Ostreococcus lucimarinus	35.70	2.00e-151	529.00
IUUC-Oga-088572	Otolemur garnettii	35.23	8.00e-150	523.00
IUUC-Oar-090363	Ovis aries	35.91	8.00e-155	540.00
IUUC-Ptr-090477	Pan troglodytes	35.06	5.00e-149	521.00
IUUC-Pan-092914	Papio anubis	34.84	9.00e-150	523.00
IUUC-Psi-093019	Pelodiscus sinensis	34.98	4.00e-145	508.00
IUUC-Pma-094303	Petromyzon marinus	34.81	3.00e-119	421.00
IUUC-Pno-094938	Phaeosphaeria nodorum	28.14	4.00e-79	289.00
IUUC-Pfo-097034	Poecilia formosa	35.71	9.00e-137	480.00
IUUC-Pab-097669	Pongo abelii	35.14	4.00e-150	524.00
IUUC-Pop-098835	Populus trichocarpa	56.24	0.00e+00	989.00
IUUC-Pca-101097	Procavia capensis	37.74	5.00e-58	218.00
IUUC-Ppe-101430	Prunus persica	55.93	0.00e+00	1036.00
IUUC-Pva-103152	Pteropus vampyrus	35.49	9.00e-153	533.00
IUUC-Pgr-103517	Puccinia graminis	29.04	1.00e-115	410.00
IUUC-Ptt-103697	Puccinia triticina	28.06	7.00e-88	317.00
IUUC-Pte-104121	Pyrenophora teres	27.31	2.00e-82	300.00
IUUC-Pyt-104672	Pyrenophora triticirepentis	27.24	1.00e-83	303.00
IUUC-Rno-105435	Rattus norvegicus	34.13	5.00e-148	517.00
IUUC-Sce-106202	Saccharomyces cerevisiae	27.34	2.00e-88	319.00
IUUC-Sha-107272	Sarcophilus harrisii	36.60	1.00e-142	499.00
IUUC-Sja-107744	Schizosaccharomyces japonicus	33.59	7.00e-146	510.00
IUUC-Spo-108256	Schizosaccharomyces pombe	33.55	2.00e-144	505.00
IUUC-Ssl-108618	Sclerotinia sclerotiorum	28.36	2.00e-99	357.00
IUUC-Smo-109445	Selaginella moellendorffii	55.11	0.00e+00	1005.00
IUUC-Sit-110051	Setaria italica	52.88	0.00e+00	982.00
IUUC-Sly-111181	Solanum lycopersicum	54.57	0.00e+00	1004.00
IUUC-Stu-112018	Solanum tuberosum	54.79	0.00e+00	1003.00
IUUC-Sar-113348	Sorex araneus	34.55	6.00e-104	371.00
IUUC-Sbi-114282	Sorghum bicolor	53.10	0.00e+00	1001.00
IUUC-Sre-114946	Sporisorium reilianum	29.79	2.00e-86	313.00
IUUC-Ssc-115287	Sus scrofa	35.88	1.00e-151	530.00
IUUC-Tgu-117138	Taeniopygia guttata	33.37	4.00e-124	438.00
IUUC-Tru-118232	Takifugu rubripes	35.04	5.00e-136	478.00
IUUC-Tsy-119502	Tarsius syrichta	28.97	8.00e-102	364.00
IUUC-Tni-120378	Tetraodon nigroviridis	35.71	1.00e-135	476.00
IUUC-Tca-121506	Theobroma cacao	54.47	0.00e+00	972.00
IUUC-Tre-122166	Trichoderma reesei	28.59	6.00e-96	345.00
IUUC-Tvi-122385	Trichoderma virens	28.31	8.00e-97	347.00
IUUC-Tae-122836	Triticum aestivum	53.42	0.00e+00	1011.00
IUUC-Tur-126490	Triticum urartu	45.19	0.00e+00	759.00
IUUC-Tme-127157	Tuber melanosporum	29.84	1.00e-89	323.00
IUUC-Tbe-127981	Tupaia belangeri	35.12	4.00e-132	464.00
IUUC-Ttr-128886	Tursiops truncatus	35.30	3.00e-149	521.00
IUUC-Uma-129439	Ustilago maydis	30.32	1.00e-91	331.00
IUUC-Vda-129760	Verticillium dahliae	27.82	3.00e-93	336.00
IUUC-Vpa-130456	Vicugna pacos	35.58	2.00e-151	529.00
IUUC-Vvi-131086	Vitis vinifera	55.88	0.00e+00	1036.00
IUUC-Xtr-131829	Xenopus tropicalis	35.39	1.00e-158	553.00
IUUC-Xma-133588	Xiphophorus maculatus	35.31	6.00e-135	474.00
IUUC-Yli-134328	Yarrowia lipolytica	30.87	6.00e-98	351.00
IUUC-Zma-135808	Zea mays	52.21	0.00e+00	987.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence