iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oba-075635

Ensembl Protein ID

OBART03G04010.1

UniProt Accession

A0A0D3FDX2; A0A0D3FDX2_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OBART03G04010	OBART03G04010.1	OBART03G04010.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-50	168.0	150	188
UBD/Beta-Prp	5.80e-104	348.4	117	431

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH d vt+l f  s++ lvs+s D+ i+vWDl+t+++l+
   Q: 150  GHRDQVTGLVFldSGKKLVSCSKDKLIRVWDLDTQHCLQ 188
           8**********95559*********************97 PP

UBD/Beta-Prp

   S: 17   kfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklv 110
            f p++ ++a+gs+d  i++wdv  +  l +l gh ++vt + f ++gk lv++s+D++i+vwdl+t  c++++ gh ++++s++++ps  +lv
   Q: 117  VFGPSGAIIASGSKDCDIILWDVVAQAGLYRLRGHRDQVTGLVFLDSGKKLVSCSKDKLIRVWDLDTQHCLQIVGGHRSEIWSIDVDPSERFLV 210
           57899***************************************************************************************** PP
   S: 111  sGshdrtirvwdletgqclee.............tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl......................... 166
           sGs+d+ +rv+ +++  +  e             + ++ ++ v +v+++++gnl++   + +tv ++++                         
   Q: 211  SGSADQELRVFTVRKSAEEGEdwskwdmlklfgeIPRQSKERVATVKFNKNGNLVACQVAGKTVDIYRVldeteaarkakrrmhrkkekalaks 304
           **************99999999****************************************************************99999999 PP
   S: 167  ..........................ktgkllrtltgghtdsvyslsfdsng......kelvsgsldgtvklwdlqtgec....vrtlnghtdn 224
                                        kll+ l+   ++++ s++f++n         l    +++ ++ +++ ++++      +++gh++ 
   Q: 305  maaegngtvidplsaqdlqnptpvvtDIFKLLHVLR--VNKKICSVAFSPNNppkgclATLSLSLNNNMLETYSVDNENVskmySIEMHGHRSD 396
           999999999999999999997777666667777776..488999999***99**999777777778999*******5555444477899***** PP
   S: 225  vksvrfspnderlvsgssDgsiriWdlrsgdllktl 260
           ++s+++ ++d++l+s+s ++ ++iW+  +gd+l+t+
   Q: 397  IRSLALNSEDNLLMSTS-HNAVKIWNPSTGDCLRTI 431
           ****************8.9**************997 PP

Organism

Oryza barthii

Protein Sequence
(Fasta)

MVKAYLRYEP AISFGVVASP ESNVAYDPSG RLLLAAALDR FAAWDLKRGL PSLSFATASP 60
SPSLAVFCLA TFPSAASASA SSIASGHADG SIRLWDTETG SCEATLHGHR SAASALVFGP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCATAAACC CTAACCGCAG CGACGCACTC CACCTCCTCC TCCACCACGC CGCCGGCGGC 60
CGGGCGCCAT GGTGAAGGCC TACCTCCGGT ACGAGCCGGC GATCTCCTTC GGCGTGGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR003143--Cyt_cd1_C
IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	80.81	0.00e+00	1346.00
IUUC-Aml-001245	Ailuropoda melanoleuca	36.25	3.00e-165	575.00
IUUC-Atr-002700	Amborella trichopoda	56.56	0.00e+00	1009.00
IUUC-Apl-004164	Anas platyrhynchos	40.79	4.00e-138	484.00
IUUC-Aca-004765	Anolis carolinensis	37.99	3.00e-172	598.00
IUUC-Aly-006503	Arabidopsis lyrata	58.56	0.00e+00	1045.00
IUUC-Ath-006848	Arabidopsis thaliana	59.42	0.00e+00	1074.00
IUUC-Ago-007909	Ashbya gossypii	33.75	2.00e-148	519.00
IUUC-Acl-008238	Aspergillus clavatus	36.88	2.00e-158	552.00
IUUC-Afl-008544	Aspergillus flavus	36.24	6.00e-152	531.00
IUUC-Afu-008868	Aspergillus fumigatus	36.13	1.00e-153	536.00
IUUC-Ani-009367	Aspergillus nidulans	35.68	7.00e-154	537.00
IUUC-Ang-009732	Aspergillus niger	36.39	2.00e-159	556.00
IUUC-Aor-010140	Aspergillus oryzae	36.59	2.00e-154	538.00
IUUC-Ate-010572	Aspergillus terreus	36.43	1.00e-156	547.00
IUUC-Ame-010956	Astyanax mexicanus	36.41	1.00e-158	553.00
IUUC-Bgr-012296	Blumeria graminis	34.79	3.00e-157	548.00
IUUC-Bta-012716	Bos taurus	36.78	1.00e-169	589.00
IUUC-Bci-013699	Botrytis cinerea	34.62	2.00e-152	532.00
IUUC-Bdi-014525	Brachypodium distachyon	86.49	0.00e+00	1495.00
IUUC-Bol-015117	Brassica oleracea	58.12	0.00e+00	1011.00
IUUC-Bra-016869	Brassica rapa	58.01	0.00e+00	1015.00
IUUC-Cel-018570	Caenorhabditis elegans	31.33	5.00e-96	345.00
IUUC-Cja-019425	Callithrix jacchus	37.01	7.00e-169	587.00
IUUC-Cfa-020787	Canis familiaris	36.49	2.00e-165	575.00
IUUC-Cpo-021729	Cavia porcellus	39.25	2.00e-132	465.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	46.73	1.00e-114	407.00
IUUC-Csa-024098	Chlorocebus sabaeus	37.09	5.00e-172	597.00
IUUC-Cho-024495	Choloepus hoffmanni	35.34	8.00e-94	337.00
IUUC-Cin-025245	Ciona intestinalis	34.01	9.00e-102	363.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	34.81	1.00e-147	516.00
IUUC-Cne-026835	Cryptococcus neoformans	40.03	3.00e-110	392.00
IUUC-Cme-027162	Cyanidioschyzon merolae	26.40	2.00e-58	220.00
IUUC-Dre-027874	Danio rerio	39.00	3.00e-174	605.00
IUUC-Dno-028905	Dasypus novemcinctus	37.41	6.00e-171	594.00
IUUC-Dor-030383	Dipodomys ordii	32.05	2.00e-66	246.00
IUUC-Dse-031297	Dothistroma septosporum	33.82	2.00e-144	506.00
IUUC-Dme-031956	Drosophila melanogaster	31.29	4.00e-123	435.00
IUUC-Ete-032608	Echinops telfairi	35.94	2.00e-98	352.00
IUUC-Eca-034181	Equus caballus	36.60	3.00e-167	582.00
IUUC-Eeu-034495	Erinaceus europaeus	36.81	4.00e-163	568.00
IUUC-Fca-035994	Felis catus	37.21	6.00e-159	554.00
IUUC-Fal-036611	Ficedula albicollis	43.96	7.00e-128	451.00
IUUC-Fox-037807	Fusarium oxysporum	34.56	4.00e-155	541.00
IUUC-Fso-038090	Fusarium solani	35.03	9.00e-151	527.00
IUUC-Gmo-039018	Gadus morhua	32.53	2.00e-82	300.00
IUUC-Ggr-039748	Gaeumannomyces graminis	35.54	7.00e-155	540.00
IUUC-Gga-040707	Gallus gallus	38.40	4.00e-171	594.00
IUUC-Gac-042334	Gasterosteus aculeatus	32.38	2.00e-72	266.00
IUUC-Gma-043860	Glycine max	61.13	0.00e+00	1046.00
IUUC-Ggo-045334	Gorilla gorilla	37.26	4.00e-168	584.00
IUUC-Hsa-046996	Homo sapiens	37.13	5.00e-169	587.00
IUUC-Hvu-047381	Hordeum vulgare	85.36	0.00e+00	881.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	37.13	3.00e-167	582.00
IUUC-Kpa-049185	Komagataella pastoris	31.97	1.00e-142	499.00
IUUC-Lch-050098	Latimeria chalumnae	36.02	2.00e-146	512.00
IUUC-Lpe-050710	Leersia perrieri	89.93	0.00e+00	1541.00
IUUC-Loc-052745	Lepisosteus oculatus	36.41	1.00e-159	556.00
IUUC-Lma-053104	Leptosphaeria maculans	34.59	8.00e-157	548.00
IUUC-Laf-054395	Loxodonta africana	37.95	5.00e-171	594.00
IUUC-Mcc-055077	Macaca mulatta	37.09	3.00e-170	592.00
IUUC-Meu-056418	Macropus eugenii	42.12	4.00e-96	345.00
IUUC-Mor-057031	Magnaporthe oryzae	35.05	6.00e-140	491.00
IUUC-Mpo-057420	Magnaporthe poae	35.05	1.00e-148	520.00
IUUC-Mtr-057838	Medicago truncatula	60.32	0.00e+00	1097.00
IUUC-Mla-058854	Melampsora laricipopulina	34.02	1.00e-138	486.00
IUUC-Mga-060120	Meleagris gallopavo	37.01	5.00e-152	531.00
IUUC-Mvi-060407	Microbotryum violaceum	40.54	6.00e-126	444.00
IUUC-Mmr-060635	Microcebus murinus	36.56	1.00e-168	586.00
IUUC-Mdo-063023	Monodelphis domestica	36.68	3.00e-170	591.00
IUUC-Mmu-064103	Mus musculus	36.71	2.00e-173	602.00
IUUC-Mac-065569	Musa acuminata	70.92	0.00e+00	1301.00
IUUC-Mpu-066462	Mustela putorius furo	36.33	5.00e-166	577.00
IUUC-Mlu-067894	Myotis lucifugus	36.92	4.00e-167	581.00
IUUC-Nfi-068321	Neosartorya fischeri	36.39	2.00e-155	542.00
IUUC-Ncr-068661	Neurospora crassa	35.30	1.00e-155	543.00
IUUC-Nle-069409	Nomascus leucogenys	37.24	7.00e-171	593.00
IUUC-Opr-070445	Ochotona princeps	40.70	6.00e-122	431.00
IUUC-Ont-072339	Oreochromis niloticus	37.04	4.00e-166	578.00
IUUC-Oan-073688	Ornithorhynchus anatinus	37.04	7.00e-159	553.00
IUUC-Ocu-074227	Oryctolagus cuniculus	37.16	2.00e-170	592.00
IUUC-Obr-076897	Oryza brachyantha	92.14	0.00e+00	1607.00
IUUC-Ogl-077555	Oryza glaberrima	99.89	0.00e+00	1660.00
IUUC-Ogu-078724	Oryza glumaepatula	99.36	0.00e+00	1655.00
IUUC-Oin-080030	Oryza indica	99.36	0.00e+00	1647.00
IUUC-Olo-080687	Oryza longistaminata	93.36	0.00e+00	1577.00
IUUC-Ome-081867	Oryza meridionalis	98.51	0.00e+00	1636.00
IUUC-Oni-082559	Oryza nivara	99.26	0.00e+00	1644.00
IUUC-Opu-083332	Oryza punctata	90.17	0.00e+00	1456.00
IUUC-Oru-084455	Oryza rufipogon	99.26	0.00e+00	1646.00
IUUC-Osa-085793	Oryza sativa	99.26	0.00e+00	1646.00
IUUC-Ola-087395	Oryzias latipes	52.58	5.00e-103	368.00
IUUC-Olu-087768	Ostreococcus lucimarinus	43.35	0.00e+00	638.00
IUUC-Oga-088574	Otolemur garnettii	36.78	1.00e-167	583.00
IUUC-Oar-089453	Ovis aries	36.07	5.00e-169	587.00
IUUC-Ptr-090694	Pan troglodytes	37.34	3.00e-170	591.00
IUUC-Pan-092420	Papio anubis	36.91	3.00e-168	585.00
IUUC-Psi-093683	Pelodiscus sinensis	37.70	4.00e-168	584.00
IUUC-Pma-094197	Petromyzon marinus	39.57	2.00e-38	151.00
IUUC-Pno-094783	Phaeosphaeria nodorum	34.81	8.00e-152	530.00
IUUC-Ppa-095208	Physcomitrella patens	52.21	0.00e+00	849.00
IUUC-Pfo-096299	Poecilia formosa	36.94	8.00e-173	600.00
IUUC-Pab-098706	Pongo abelii	37.38	7.00e-169	587.00
IUUC-Pop-099275	Populus trichocarpa	61.58	0.00e+00	1112.00
IUUC-Pca-100796	Procavia capensis	31.62	1.00e-110	393.00
IUUC-Ppe-101861	Prunus persica	62.05	0.00e+00	1107.00
IUUC-Pva-103241	Pteropus vampyrus	36.63	4.00e-158	551.00
IUUC-Pgr-103432	Puccinia graminis	34.17	4.00e-138	485.00
IUUC-Ptt-103742	Puccinia triticina	35.84	2.00e-116	413.00
IUUC-Pte-104069	Pyrenophora teres	34.28	3.00e-149	521.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	34.70	1.00e-154	540.00
IUUC-Rno-105219	Rattus norvegicus	35.65	9.00e-166	577.00
IUUC-Sce-106271	Saccharomyces cerevisiae	32.75	1.00e-139	489.00
IUUC-Sha-107550	Sarcophilus harrisii	36.51	1.00e-165	576.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	34.70	1.00e-149	523.00
IUUC-Spo-108239	Schizosaccharomyces pombe	34.82	4.00e-158	551.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	34.61	1.00e-154	540.00
IUUC-Smo-109477	Selaginella moellendorffii	51.67	0.00e+00	904.00
IUUC-Sit-110000	Setaria italica	85.55	0.00e+00	1444.00
IUUC-Sly-111595	Solanum lycopersicum	59.44	0.00e+00	1020.00
IUUC-Stu-112516	Solanum tuberosum	59.62	0.00e+00	1029.00
IUUC-Sar-113195	Sorex araneus	43.53	3.00e-121	429.00
IUUC-Sbi-114465	Sorghum bicolor	83.10	0.00e+00	1438.00
IUUC-Sre-115006	Sporisorium reilianum	34.16	7.00e-141	494.00
IUUC-Ssc-115929	Sus scrofa	36.92	2.00e-168	585.00
IUUC-Tgu-117282	Taeniopygia guttata	43.45	8.00e-125	441.00
IUUC-Tru-118406	Takifugu rubripes	35.67	4.00e-163	568.00
IUUC-Tsy-119170	Tarsius syrichta	36.70	1.00e-165	576.00
IUUC-Tni-119721	Tetraodon nigroviridis	36.85	5.00e-156	544.00
IUUC-Tca-121761	Theobroma cacao	63.19	0.00e+00	1127.00
IUUC-Tre-121908	Trichoderma reesei	34.53	1.00e-152	533.00
IUUC-Tvi-122547	Trichoderma virens	35.37	2.00e-155	542.00
IUUC-Tae-125496	Triticum aestivum	85.98	0.00e+00	1448.00
IUUC-Tur-126811	Triticum urartu	86.22	0.00e+00	1397.00
IUUC-Tme-126987	Tuber melanosporum	36.94	3.00e-167	581.00
IUUC-Tbe-127315	Tupaia belangeri	43.62	4.00e-106	379.00
IUUC-Ttr-129165	Tursiops truncatus	32.22	5.00e-128	451.00
IUUC-Uma-129651	Ustilago maydis	34.44	3.00e-143	502.00
IUUC-Vda-129973	Verticillium dahliae	34.64	2.00e-144	506.00
IUUC-Vpa-130163	Vicugna pacos	30.80	5.00e-57	215.00
IUUC-Vvi-131402	Vitis vinifera	61.86	0.00e+00	1093.00
IUUC-Xtr-132296	Xenopus tropicalis	38.31	8.00e-169	587.00
IUUC-Xma-133028	Xiphophorus maculatus	37.43	6.00e-173	600.00
IUUC-Yli-134484	Yarrowia lipolytica	37.15	1.00e-154	540.00
IUUC-Zma-135938	Zea mays	81.27	0.00e+00	1420.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence