iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mpu-066877

Ensembl Protein ID

ENSMPUP00000017874.1

UniProt Accession

M3Z2R2; M3Z2R2_MUSPF

Genbank Protein ID

ENSMPUP00000017874

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEYP01091137

Gene Name

WDR43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMPUG00000017985.1	ENSMPUT00000018135.1	ENSMPUP00000017874.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-15	56.3	124	159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH ++v+c+++ +d + l s+sdD+ i  W++ t++
   Q: 124  GHDNKVNCIQWhQDnGCLYSCSDDKYIVEWNTQTCK 159
           8***********77799********99866665554 PP

Organism

Mustela putorius furo

Protein Sequence
(Fasta)

MAAGGRGVAD PLSPAGLPCA FSPLNQAYFA LASADGQLRV WETANNRLHQ EYVPSAHLSG 60
TCTCLAWAPA RLQAKESPQR KKRKSEAIET SNQIDLLAIG TAVGSILLYS TVKGELHSKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCGG GTGGCCGTGG TGTTGCCGAC CCCCTGTCCC CGGCAGGGCT TCCGTGCGCT 60
TTCTCCCCGC TGAACCAGGC CTACTTCGCT TTGGCGTCTG CCGACGGTCA GTTGCGAGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0001650--C:fibrillar center
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	97.12	0.00e+00	1156.00
IUUC-Atr-002533	Amborella trichopoda	20.97	1.00e-23	104.00
IUUC-Apl-003242	Anas platyrhynchos	75.33	0.00e+00	817.00
IUUC-Aca-004607	Anolis carolinensis	72.27	0.00e+00	870.00
IUUC-Aly-006074	Arabidopsis lyrata	24.64	3.00e-16	80.10
IUUC-Ath-007222	Arabidopsis thaliana	24.64	7.00e-16	79.00
IUUC-Ame-011014	Astyanax mexicanus	54.78	7.00e-173	600.00
IUUC-Bta-012605	Bos taurus	94.16	0.00e+00	1145.00
IUUC-Bdi-014072	Brachypodium distachyon	19.72	4.00e-18	86.30
IUUC-Bol-016255	Brassica oleracea	23.83	2.00e-22	100.00
IUUC-Bra-016850	Brassica rapa	24.75	3.00e-24	106.00
IUUC-Cja-019620	Callithrix jacchus	92.17	0.00e+00	1115.00
IUUC-Cfa-020520	Canis familiaris	96.66	0.00e+00	1169.00
IUUC-Cpo-022456	Cavia porcellus	88.02	0.00e+00	1054.00
IUUC-Cho-024726	Choloepus hoffmanni	91.02	0.00e+00	1064.00
IUUC-Cin-025761	Ciona intestinalis	36.01	4.00e-99	355.00
IUUC-Dre-028051	Danio rerio	55.13	2.00e-174	605.00
IUUC-Dno-030031	Dasypus novemcinctus	91.49	0.00e+00	1113.00
IUUC-Dme-031653	Drosophila melanogaster	27.23	8.00e-47	181.00
IUUC-Ete-032863	Echinops telfairi	81.25	2.00e-95	343.00
IUUC-Eca-033243	Equus caballus	91.62	0.00e+00	1005.00
IUUC-Eeu-034970	Erinaceus europaeus	88.33	0.00e+00	807.00
IUUC-Fca-036009	Felis catus	96.10	0.00e+00	1147.00
IUUC-Fal-037264	Ficedula albicollis	73.00	0.00e+00	789.00
IUUC-Gmo-039124	Gadus morhua	56.85	4.00e-180	624.00
IUUC-Gga-040862	Gallus gallus	73.72	0.00e+00	870.00
IUUC-Gac-041468	Gasterosteus aculeatus	55.33	0.00e+00	645.00
IUUC-Gma-042795	Glycine max	20.53	3.00e-15	76.60
IUUC-Ggo-044432	Gorilla gorilla	92.50	0.00e+00	1120.00
IUUC-Hsa-047036	Homo sapiens	92.17	0.00e+00	1117.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	91.65	0.00e+00	1111.00
IUUC-Lch-049553	Latimeria chalumnae	66.49	0.00e+00	753.00
IUUC-Laf-053462	Loxodonta africana	89.98	0.00e+00	1133.00
IUUC-Mcc-055239	Macaca mulatta	92.33	0.00e+00	1117.00
IUUC-Mtr-057977	Medicago truncatula	21.28	1.00e-18	88.20
IUUC-Mga-060079	Meleagris gallopavo	74.76	0.00e+00	793.00
IUUC-Mmr-061472	Microcebus murinus	90.98	0.00e+00	1108.00
IUUC-Mdo-061972	Monodelphis domestica	78.69	0.00e+00	1021.00
IUUC-Mmu-063354	Mus musculus	86.81	0.00e+00	1047.00
IUUC-Mac-065064	Musa acuminata	23.74	6.00e-18	85.50
IUUC-Mlu-067476	Myotis lucifugus	90.82	0.00e+00	1091.00
IUUC-Nle-069119	Nomascus leucogenys	92.17	0.00e+00	1115.00
IUUC-Ont-072093	Oreochromis niloticus	55.46	0.00e+00	678.00
IUUC-Oan-072944	Ornithorhynchus anatinus	72.55	0.00e+00	871.00
IUUC-Ocu-074472	Oryctolagus cuniculus	91.49	0.00e+00	1068.00
IUUC-Oba-075009	Oryza barthii	19.70	5.00e-15	76.30
IUUC-Ogl-077189	Oryza glaberrima	19.28	2.00e-15	77.80
IUUC-Oin-079064	Oryza indica	19.47	9.00e-15	75.10
IUUC-Opu-083604	Oryza punctata	19.62	2.00e-13	70.50
IUUC-Oru-084620	Oryza rufipogon	19.47	7.00e-15	75.50
IUUC-Osa-085345	Oryza sativa	19.47	2.00e-15	77.40
IUUC-Ola-086626	Oryzias latipes	55.46	0.00e+00	667.00
IUUC-Oga-087911	Otolemur garnettii	90.68	0.00e+00	1090.00
IUUC-Ptr-091603	Pan troglodytes	91.83	0.00e+00	1114.00
IUUC-Pan-092569	Papio anubis	92.33	0.00e+00	1117.00
IUUC-Pma-094287	Petromyzon marinus	53.28	0.00e+00	642.00
IUUC-Ppa-095327	Physcomitrella patens	25.56	3.00e-39	156.00
IUUC-Pfo-097292	Poecilia formosa	54.71	0.00e+00	645.00
IUUC-Pab-097878	Pongo abelii	92.72	0.00e+00	1106.00
IUUC-Pop-099418	Populus trichocarpa	22.39	1.00e-20	94.70
IUUC-Pca-100941	Procavia capensis	85.44	0.00e+00	1006.00
IUUC-Ppe-101779	Prunus persica	20.42	4.00e-22	99.80
IUUC-Pva-102493	Pteropus vampyrus	86.95	0.00e+00	1037.00
IUUC-Rno-105084	Rattus norvegicus	87.48	0.00e+00	1040.00
IUUC-Sha-107486	Sarcophilus harrisii	80.73	0.00e+00	991.00
IUUC-Smo-108825	Selaginella moellendorffii	22.54	3.00e-21	96.70
IUUC-Sit-110825	Setaria italica	20.93	1.00e-18	88.20
IUUC-Sly-111365	Solanum lycopersicum	23.54	3.00e-23	103.00
IUUC-Stu-112812	Solanum tuberosum	23.65	4.00e-22	99.40
IUUC-Sar-113326	Sorex araneus	92.98	2.00e-139	489.00
IUUC-Sbi-114426	Sorghum bicolor	20.89	4.00e-21	96.30
IUUC-Tgu-116726	Taeniopygia guttata	70.47	0.00e+00	854.00
IUUC-Tru-117848	Takifugu rubripes	55.63	0.00e+00	642.00
IUUC-Tsy-119091	Tarsius syrichta	64.44	2.00e-133	468.00
IUUC-Tni-120591	Tetraodon nigroviridis	55.48	0.00e+00	644.00
IUUC-Tca-121576	Theobroma cacao	21.46	2.00e-22	100.00
IUUC-Tae-125648	Triticum aestivum	20.94	2.00e-17	84.30
IUUC-Tbe-127832	Tupaia belangeri	92.94	0.00e+00	972.00
IUUC-Ttr-128812	Tursiops truncatus	94.47	0.00e+00	995.00
IUUC-Xma-133557	Xiphophorus maculatus	55.52	0.00e+00	647.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence