iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-117499

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01026270

Gene Name

RABGEF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000005373.1	ENSTGUT00000005590.1	ENSTGUP00000005535.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/ZnF_A20	8.30e-19	67.1	13	47

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/ZnF_A20

   S: 1    dpskllCkkgCgfYGnpetngyCSkCyreelrrrr 35
           d+s+llCkkgCg+YGnp+++g+CSkC+ree++++r
   Q: 13   DQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKAR 47
           79*******************************86 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

MNLKSERRGI HVDQSELLCK KGCGYYGNPA WQGFCSKCWR EEYHKARQKQ IQEDWELAER 60
LQREEEEAYA SSQSTQGAQS LTFSKFEEKK TNEKTRKVTT VKKFFTASSR AGAKKEIQEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACCTGA AATCCGAACG TAGAGGGATC CACGTGGACC AGTCGGAGCT GCTGTGCAAG 60
AAGGGCTGTG GTTACTATGG CAATCCTGCC TGGCAGGGCT TTTGCTCCAA GTGCTGGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003123--VPS9
IPR002653--Znf_A20

PROSITE

PS51205--VPS9
PS51036--ZF_A20

Pfam

PF02204--VPS9
PF01754--zf-A20

SMART

SM00167--VPS9
SM00259--ZnF_A20

Gene Ontology

GO:0031982--C:vesicle
GO:0003677--F:DNA binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0050728--P:negative regulation of inflammatory response
GO:1900165--P:negative regulation of interleukin-6 secretion
GO:1900235--P:negative regulation of Kit signaling pathway
GO:0002686--P:negative regulation of leukocyte migration
GO:0043305--P:negative regulation of mast cell degranulation
GO:0001933--P:negative regulation of protein phosphorylation
GO:0046580--P:negative regulation of Ras protein signal transduction
GO:0048261--P:negative regulation of receptor-mediated endocytosis
GO:0060368--P:regulation of Fc receptor mediated stimulatory signaling pathway

KEGG

tgu:100226159

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000198	Aegilops tauschii	30.15	1.00e-20	94.00
IUUC-Aml-001771	Ailuropoda melanoleuca	75.79	0.00e+00	767.00
IUUC-Atr-003154	Amborella trichopoda	30.80	7.00e-22	97.80
IUUC-Apl-004018	Anas platyrhynchos	95.73	0.00e+00	896.00
IUUC-Aca-004889	Anolis carolinensis	31.91	2.00e-08	53.90
IUUC-Aly-006138	Arabidopsis lyrata	32.41	2.00e-26	113.00
IUUC-Ath-006747	Arabidopsis thaliana	32.02	4.00e-26	112.00
IUUC-Ago-007776	Ashbya gossypii	29.71	2.00e-23	103.00
IUUC-Acl-008235	Aspergillus clavatus	30.42	6.00e-28	119.00
IUUC-Afl-008570	Aspergillus flavus	31.33	1.00e-30	127.00
IUUC-Afu-008815	Aspergillus fumigatus	31.53	3.00e-28	119.00
IUUC-Ani-009381	Aspergillus nidulans	30.43	7.00e-29	122.00
IUUC-Ang-009615	Aspergillus niger	29.79	1.00e-30	127.00
IUUC-Aor-010195	Aspergillus oryzae	31.33	2.00e-31	129.00
IUUC-Ate-010514	Aspergillus terreus	32.14	3.00e-29	123.00
IUUC-Ame-011365	Astyanax mexicanus	66.14	0.00e+00	669.00
IUUC-Bgr-012102	Blumeria graminis	28.57	1.00e-28	121.00
IUUC-Bta-013124	Bos taurus	90.43	0.00e+00	829.00
IUUC-Bci-013943	Botrytis cinerea	31.39	1.00e-28	120.00
IUUC-Bdi-014539	Brachypodium distachyon	34.12	2.00e-27	116.00
IUUC-Bol-016580	Brassica oleracea	34.66	3.00e-31	129.00
IUUC-Bra-017843	Brassica rapa	34.92	2.00e-31	129.00
IUUC-Cel-018199	Caenorhabditis elegans	33.59	6.00e-58	218.00
IUUC-Cja-019941	Callithrix jacchus	90.22	0.00e+00	825.00
IUUC-Cfa-020845	Canis familiaris	89.35	0.00e+00	749.00
IUUC-Cpo-022037	Cavia porcellus	89.41	0.00e+00	819.00
IUUC-Cre-022696	Chlamydomonas reinhardtii	34.66	1.00e-21	97.40
IUUC-Csa-023272	Chlorocebus sabaeus	89.41	0.00e+00	820.00
IUUC-Cho-025076	Choloepus hoffmanni	79.84	0.00e+00	696.00
IUUC-Cin-025400	Ciona intestinalis	45.09	2.00e-116	411.00
IUUC-Csv-025941	Ciona savignyi	38.73	9.00e-89	320.00
IUUC-Cgl-026725	Colletotrichum gloeosporioides	29.73	5.00e-28	119.00
IUUC-Cne-027057	Cryptococcus neoformans	30.38	5.00e-33	135.00
IUUC-Dre-028484	Danio rerio	69.90	0.00e+00	671.00
IUUC-Dno-028906	Dasypus novemcinctus	90.04	0.00e+00	813.00
IUUC-Dor-030124	Dipodomys ordii	81.22	0.00e+00	706.00
IUUC-Dse-031437	Dothistroma septosporum	27.80	4.00e-25	109.00
IUUC-Dme-031696	Drosophila melanogaster	34.95	3.00e-71	262.00
IUUC-Ete-032573	Echinops telfairi	85.07	0.00e+00	662.00
IUUC-Eca-033711	Equus caballus	90.02	0.00e+00	837.00
IUUC-Eeu-034459	Erinaceus europaeus	64.56	1.00e-69	257.00
IUUC-Fca-035447	Felis catus	87.78	0.00e+00	837.00
IUUC-Fal-036605	Ficedula albicollis	97.95	0.00e+00	884.00
IUUC-Fox-037967	Fusarium oxysporum	27.27	8.00e-19	88.60
IUUC-Fso-038110	Fusarium solani	30.25	3.00e-29	123.00
IUUC-Gmo-038785	Gadus morhua	65.81	0.00e+00	674.00
IUUC-Ggr-039760	Gaeumannomyces graminis	30.91	6.00e-28	119.00
IUUC-Gga-040584	Gallus gallus	95.73	0.00e+00	895.00
IUUC-Gac-042317	Gasterosteus aculeatus	62.25	4.00e-163	567.00
IUUC-Gma-044237	Glycine max	36.87	2.00e-25	109.00
IUUC-Ggo-044498	Gorilla gorilla	78.25	0.00e+00	686.00
IUUC-Hsa-046625	Homo sapiens	89.82	0.00e+00	822.00
IUUC-Hvu-047155	Hordeum vulgare	33.33	4.00e-27	115.00
IUUC-Itr-048753	Ictidomys tridecemlineatus	89.21	0.00e+00	825.00
IUUC-Kpa-049160	Komagataella pastoris	29.72	8.00e-24	105.00
IUUC-Lch-050529	Latimeria chalumnae	78.50	0.00e+00	860.00
IUUC-Lpe-051024	Leersia perrieri	31.42	4.00e-28	119.00
IUUC-Loc-052644	Lepisosteus oculatus	68.16	0.00e+00	659.00
IUUC-Lma-053102	Leptosphaeria maculans	30.13	4.00e-26	113.00
IUUC-Laf-054337	Loxodonta africana	87.78	0.00e+00	825.00
IUUC-Mcc-055659	Macaca mulatta	90.06	1.00e-167	582.00
IUUC-Meu-056084	Macropus eugenii	74.21	5.00e-91	327.00
IUUC-Mor-057255	Magnaporthe oryzae	29.82	2.00e-27	117.00
IUUC-Mpo-057454	Magnaporthe poae	30.91	1.00e-29	124.00
IUUC-Mtr-058098	Medicago truncatula	34.23	9.00e-32	130.00
IUUC-Mla-059068	Melampsora laricipopulina	30.68	7.00e-31	127.00
IUUC-Mga-059624	Meleagris gallopavo	81.63	0.00e+00	886.00
IUUC-Mvi-060282	Microbotryum violaceum	28.40	2.00e-26	114.00
IUUC-Mmr-061142	Microcebus murinus	90.43	0.00e+00	849.00
IUUC-Mdo-062289	Monodelphis domestica	88.39	0.00e+00	860.00
IUUC-Mmu-063961	Mus musculus	89.21	0.00e+00	819.00
IUUC-Mac-065188	Musa acuminata	33.46	3.00e-24	105.00
IUUC-Mpu-066291	Mustela putorius furo	89.23	0.00e+00	817.00
IUUC-Mlu-067431	Myotis lucifugus	85.98	0.00e+00	799.00
IUUC-Nfi-068422	Neosartorya fischeri	30.33	9.00e-30	125.00
IUUC-Ncr-068843	Neurospora crassa	28.35	1.00e-29	124.00
IUUC-Nle-069079	Nomascus leucogenys	89.61	0.00e+00	819.00
IUUC-Opr-070790	Ochotona princeps	84.26	7.00e-50	191.00
IUUC-Ont-071789	Oreochromis niloticus	68.34	0.00e+00	626.00
IUUC-Oan-072946	Ornithorhynchus anatinus	86.82	0.00e+00	790.00
IUUC-Ocu-073816	Oryctolagus cuniculus	89.84	0.00e+00	816.00
IUUC-Oba-075738	Oryza barthii	31.62	2.00e-19	90.10
IUUC-Obr-076355	Oryza brachyantha	33.87	1.00e-27	117.00
IUUC-Ogl-077217	Oryza glaberrima	34.11	5.00e-26	112.00
IUUC-Ogu-078197	Oryza glumaepatula	30.71	3.00e-29	122.00
IUUC-Oin-080047	Oryza indica	34.78	9.00e-28	117.00
IUUC-Olo-080317	Oryza longistaminata	30.71	3.00e-29	121.00
IUUC-Ome-081589	Oryza meridionalis	33.73	5.00e-28	119.00
IUUC-Oni-082700	Oryza nivara	31.62	2.00e-19	90.10
IUUC-Opu-083923	Oryza punctata	33.74	5.00e-21	94.40
IUUC-Oru-084318	Oryza rufipogon	31.62	2.00e-19	90.10
IUUC-Osa-086246	Oryza sativa	38.98	1.00e-06	43.90
IUUC-Ola-086730	Oryzias latipes	56.48	3.00e-150	524.00
IUUC-Olu-087719	Ostreococcus lucimarinus	33.15	1.00e-23	103.00
IUUC-Oga-088992	Otolemur garnettii	78.87	0.00e+00	840.00
IUUC-Oar-089789	Ovis aries	90.26	0.00e+00	821.00
IUUC-Ptr-091636	Pan troglodytes	89.82	0.00e+00	820.00
IUUC-Pan-092911	Papio anubis	89.61	0.00e+00	821.00
IUUC-Psi-093194	Pelodiscus sinensis	78.26	0.00e+00	846.00
IUUC-Pma-094212	Petromyzon marinus	47.08	2.00e-115	408.00
IUUC-Pno-094831	Phaeosphaeria nodorum	28.71	8.00e-26	112.00
IUUC-Ppa-095705	Physcomitrella patens	30.71	3.00e-29	122.00
IUUC-Pfo-096694	Poecilia formosa	64.43	1.00e-179	622.00
IUUC-Pab-097706	Pongo abelii	89.61	0.00e+00	819.00
IUUC-Pop-099891	Populus trichocarpa	33.21	2.00e-26	113.00
IUUC-Pca-100879	Procavia capensis	84.98	6.00e-88	317.00
IUUC-Ppe-101334	Prunus persica	32.17	6.00e-28	118.00
IUUC-Pva-103225	Pteropus vampyrus	76.36	0.00e+00	668.00
IUUC-Pgr-103564	Puccinia graminis	29.89	6.00e-30	125.00
IUUC-Ptt-103802	Puccinia triticina	28.77	5.00e-25	108.00
IUUC-Pte-104345	Pyrenophora teres	28.62	6.00e-26	112.00
IUUC-Pyt-104716	Pyrenophora triticirepentis	28.92	9.00e-27	115.00
IUUC-Rno-106101	Rattus norvegicus	89.61	0.00e+00	823.00
IUUC-Sce-106460	Saccharomyces cerevisiae	31.92	3.00e-27	115.00
IUUC-Sha-106919	Sarcophilus harrisii	75.97	0.00e+00	813.00
IUUC-Sja-107880	Schizosaccharomyces japonicus	32.32	8.00e-31	128.00
IUUC-Spo-108087	Schizosaccharomyces pombe	29.69	1.00e-27	117.00
IUUC-Ssl-108614	Sclerotinia sclerotiorum	29.82	1.00e-07	51.60
IUUC-Smo-109411	Selaginella moellendorffii	34.26	4.00e-30	125.00
IUUC-Sit-110678	Setaria italica	33.33	1.00e-27	117.00
IUUC-Sly-111526	Solanum lycopersicum	35.94	7.00e-25	108.00
IUUC-Stu-112494	Solanum tuberosum	34.00	8.00e-26	111.00
IUUC-Sar-112929	Sorex araneus	93.45	3.00e-155	541.00
IUUC-Sbi-114242	Sorghum bicolor	32.14	1.00e-30	126.00
IUUC-Sre-115224	Sporisorium reilianum	31.79	1.00e-29	124.00
IUUC-Ssc-115239	Sus scrofa	89.84	0.00e+00	821.00
IUUC-Tru-118027	Takifugu rubripes	59.37	2.00e-166	578.00
IUUC-Tsy-119462	Tarsius syrichta	89.92	0.00e+00	819.00
IUUC-Tni-120855	Tetraodon nigroviridis	63.15	2.00e-174	604.00
IUUC-Tca-121213	Theobroma cacao	33.07	6.00e-26	111.00
IUUC-Tre-122186	Trichoderma reesei	30.51	4.00e-29	122.00
IUUC-Tvi-122541	Trichoderma virens	30.48	6.00e-29	122.00
IUUC-Tae-122942	Triticum aestivum	34.51	1.00e-28	120.00
IUUC-Tur-126572	Triticum urartu	34.58	2.00e-26	113.00
IUUC-Tme-127023	Tuber melanosporum	33.33	3.00e-31	129.00
IUUC-Tbe-127453	Tupaia belangeri	88.83	0.00e+00	716.00
IUUC-Ttr-128526	Tursiops truncatus	90.02	0.00e+00	826.00
IUUC-Uma-129660	Ustilago maydis	32.55	8.00e-30	125.00
IUUC-Vda-129737	Verticillium dahliae	29.45	3.00e-25	109.00
IUUC-Vpa-130505	Vicugna pacos	82.86	0.00e+00	654.00
IUUC-Vvi-131088	Vitis vinifera	33.99	2.00e-24	106.00
IUUC-Xtr-132799	Xenopus tropicalis	80.49	0.00e+00	753.00
IUUC-Xma-133345	Xiphophorus maculatus	65.03	2.00e-174	604.00
IUUC-Yli-134416	Yarrowia lipolytica	30.72	2.00e-30	126.00
IUUC-Zma-134750	Zea mays	32.14	1.00e-27	117.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence