iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tvi-122547

Ensembl Protein ID

EHK15752

UniProt Accession

G9NDI5; G9NDI5_HYPVG

Genbank Protein ID

EHK15752.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABDF02000092

Gene Name

TRIVIDRAFT_56214

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIVIDRAFT_56214	EHK15752	EHK15752

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-51	167.9	694	726
UBD/Beta-Prp	3.10e-87	291.8	568	725

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlr 31
           gH ++v+++a   s+++lv++s+D++i+vWD +
   Q: 694  GHHGEVWSIAMshSGNFLVTASHDKSIRVWDET 726
           7999*******9655****************65 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.....sgdk 108
           i ++ fspd +lla++  d+t+kv+ v++ kl   l+gh+ +v ++++s d+k++vt+s D++i++w l+ g+c  +l gh+ds+l ++f p     +g++
   Q: 568  ILSLRFSPDAKLLAVSLLDSTVKVFFVDSLKLYLNLYGHKLPVLSMDISYDSKLIVTSSADKNIRIWGLDFGDCHKALFGHQDSILQVAFVPhnsdgNGHH 668
           44599****************************************************************************************999999** PP
   S: 109  lvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl 166
           + s ++drtir wd ++ + ++  l+gh+g v++++++ +gn lv++s D+ +r+Wd 
   Q: 669  FFSSGKDRTIRYWDGDKFEQIQ-RLDGHHGEVWSIAMSHSGNFLVTASHDKSIRVWDE 725
           **********************.*********************************97 PP

Organism

Trichoderma virens

Protein Sequence
(Fasta)

MVKSYLKYEH AKSFGTILSS SSNLVWTSKD RTGTGAGQAI TAANEEVLCW DIKKGELTGR 60
WRDERCSYPV TAIAQSGVDK DMFAVGYEDG SIRIWDSKIA TVLVNFNGHK SAITHLVFDK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTCAAAT CATACCTGTG AGTAGTTCAA ATACCAGCTA CACGTGGGGG AAAGGCACCG 60
TACTGACCAT TGGTACAGCA AATACGAGCA CGCCAAGTCA TTTGGCACAA TCCTGTCCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0016021--C:integral component of membrane
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	37.28	5.00e-133	467.00
IUUC-Aml-001245	Ailuropoda melanoleuca	38.01	8.00e-172	595.00
IUUC-Atr-002700	Amborella trichopoda	34.91	5.00e-151	526.00
IUUC-Apl-004164	Anas platyrhynchos	37.65	2.00e-133	467.00
IUUC-Aca-004765	Anolis carolinensis	36.66	4.00e-167	580.00
IUUC-Aly-006503	Arabidopsis lyrata	36.82	1.00e-161	561.00
IUUC-Ath-006848	Arabidopsis thaliana	36.55	9.00e-163	565.00
IUUC-Ago-007909	Ashbya gossypii	44.01	0.00e+00	747.00
IUUC-Acl-008238	Aspergillus clavatus	61.55	0.00e+00	1228.00
IUUC-Afl-008544	Aspergillus flavus	60.45	0.00e+00	1187.00
IUUC-Afu-008868	Aspergillus fumigatus	62.24	0.00e+00	1223.00
IUUC-Ani-009367	Aspergillus nidulans	59.75	0.00e+00	1153.00
IUUC-Ang-009732	Aspergillus niger	61.63	0.00e+00	1220.00
IUUC-Aor-010140	Aspergillus oryzae	60.84	0.00e+00	1196.00
IUUC-Ate-010572	Aspergillus terreus	60.85	0.00e+00	1178.00
IUUC-Ame-010956	Astyanax mexicanus	43.92	3.00e-137	481.00
IUUC-Bgr-012296	Blumeria graminis	62.92	0.00e+00	1210.00
IUUC-Bta-012716	Bos taurus	37.60	2.00e-174	604.00
IUUC-Bci-013699	Botrytis cinerea	68.49	0.00e+00	1281.00
IUUC-Bdi-014525	Brachypodium distachyon	35.03	5.00e-147	513.00
IUUC-Bol-015117	Brassica oleracea	37.06	5.00e-159	553.00
IUUC-Bra-016869	Brassica rapa	37.27	1.00e-159	555.00
IUUC-Cel-018570	Caenorhabditis elegans	29.05	3.00e-100	358.00
IUUC-Cja-019425	Callithrix jacchus	37.55	2.00e-176	611.00
IUUC-Cfa-020787	Canis familiaris	38.43	5.00e-174	603.00
IUUC-Cpo-021729	Cavia porcellus	40.15	2.00e-141	494.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	43.21	2.00e-96	345.00
IUUC-Csa-024098	Chlorocebus sabaeus	37.80	1.00e-177	615.00
IUUC-Cho-024495	Choloepus hoffmanni	39.92	2.00e-103	368.00
IUUC-Cin-025245	Ciona intestinalis	32.95	1.00e-96	345.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	78.59	0.00e+00	1471.00
IUUC-Cne-026835	Cryptococcus neoformans	40.98	0.00e+00	645.00
IUUC-Cme-027162	Cyanidioschyzon merolae	32.87	6.00e-37	148.00
IUUC-Dre-027874	Danio rerio	36.53	2.00e-179	621.00
IUUC-Dno-028905	Dasypus novemcinctus	38.08	5.00e-175	606.00
IUUC-Dor-030383	Dipodomys ordii	40.65	3.00e-61	228.00
IUUC-Dse-031297	Dothistroma septosporum	52.26	0.00e+00	1009.00
IUUC-Dme-031956	Drosophila melanogaster	31.86	2.00e-129	455.00
IUUC-Ete-032608	Echinops telfairi	34.79	6.00e-96	343.00
IUUC-Eca-034181	Equus caballus	38.14	4.00e-173	600.00
IUUC-Eeu-034495	Erinaceus europaeus	38.41	1.00e-169	588.00
IUUC-Fca-035994	Felis catus	39.27	3.00e-170	590.00
IUUC-Fal-036611	Ficedula albicollis	36.42	1.00e-166	578.00
IUUC-Fox-037807	Fusarium oxysporum	83.68	0.00e+00	1600.00
IUUC-Fso-038090	Fusarium solani	84.20	0.00e+00	1580.00
IUUC-Gmo-039018	Gadus morhua	33.15	4.00e-83	300.00
IUUC-Ggr-039748	Gaeumannomyces graminis	72.18	0.00e+00	1405.00
IUUC-Gga-040707	Gallus gallus	43.11	1.00e-132	465.00
IUUC-Gac-042334	Gasterosteus aculeatus	31.42	2.00e-73	268.00
IUUC-Gma-043033	Glycine max	36.25	2.00e-157	548.00
IUUC-Ggo-045334	Gorilla gorilla	37.85	5.00e-175	606.00
IUUC-Hsa-046996	Homo sapiens	37.85	2.00e-174	604.00
IUUC-Hvu-047381	Hordeum vulgare	33.22	3.00e-81	294.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	37.32	2.00e-170	591.00
IUUC-Kpa-049185	Komagataella pastoris	41.33	0.00e+00	721.00
IUUC-Lch-050098	Latimeria chalumnae	34.83	4.00e-154	537.00
IUUC-Lpe-050710	Leersia perrieri	34.06	2.00e-146	511.00
IUUC-Loc-052745	Lepisosteus oculatus	35.63	2.00e-166	578.00
IUUC-Lma-053104	Leptosphaeria maculans	58.51	0.00e+00	1125.00
IUUC-Laf-054395	Loxodonta africana	38.02	5.00e-173	600.00
IUUC-Mcc-055077	Macaca mulatta	38.04	8.00e-176	609.00
IUUC-Meu-056418	Macropus eugenii	42.16	1.00e-96	346.00
IUUC-Mor-057031	Magnaporthe oryzae	71.41	0.00e+00	1283.00
IUUC-Mpo-057420	Magnaporthe poae	73.24	0.00e+00	1403.00
IUUC-Mtr-057838	Medicago truncatula	36.83	1.00e-162	565.00
IUUC-Mla-058854	Melampsora laricipopulina	41.08	0.00e+00	669.00
IUUC-Mga-060120	Meleagris gallopavo	40.09	5.00e-133	467.00
IUUC-Mvi-060407	Microbotryum violaceum	45.45	0.00e+00	798.00
IUUC-Mmr-060635	Microcebus murinus	38.03	9.00e-172	595.00
IUUC-Mdo-063023	Monodelphis domestica	37.13	6.00e-171	593.00
IUUC-Mmu-064103	Mus musculus	37.44	3.00e-176	610.00
IUUC-Mac-065569	Musa acuminata	36.29	4.00e-155	540.00
IUUC-Mpu-066462	Mustela putorius furo	38.29	5.00e-174	603.00
IUUC-Mlu-067894	Myotis lucifugus	38.25	1.00e-174	605.00
IUUC-Nfi-068321	Neosartorya fischeri	61.73	0.00e+00	1209.00
IUUC-Ncr-068661	Neurospora crassa	77.56	0.00e+00	1436.00
IUUC-Nle-069409	Nomascus leucogenys	37.79	2.00e-175	607.00
IUUC-Opr-070445	Ochotona princeps	41.87	2.00e-129	455.00
IUUC-Ont-072339	Oreochromis niloticus	37.68	4.00e-177	613.00
IUUC-Oan-073688	Ornithorhynchus anatinus	37.76	4.00e-161	560.00
IUUC-Ocu-074227	Oryctolagus cuniculus	37.58	7.00e-174	602.00
IUUC-Oba-075635	Oryza barthii	34.95	4.00e-141	494.00
IUUC-Obr-076897	Oryza brachyantha	35.71	2.00e-150	524.00
IUUC-Ogl-077555	Oryza glaberrima	34.85	1.00e-140	492.00
IUUC-Ogu-078724	Oryza glumaepatula	35.55	5.00e-142	496.00
IUUC-Oin-080030	Oryza indica	35.06	9.00e-141	492.00
IUUC-Olo-080687	Oryza longistaminata	33.16	6.00e-131	460.00
IUUC-Ome-081867	Oryza meridionalis	35.16	2.00e-141	494.00
IUUC-Oni-082559	Oryza nivara	35.06	1.00e-140	492.00
IUUC-Opu-083332	Oryza punctata	36.59	2.00e-136	478.00
IUUC-Oru-084455	Oryza rufipogon	34.95	3.00e-140	491.00
IUUC-Osa-085793	Oryza sativa	34.95	3.00e-140	491.00
IUUC-Ola-087395	Oryzias latipes	41.98	6.00e-123	433.00
IUUC-Olu-087768	Ostreococcus lucimarinus	41.02	8.00e-114	403.00
IUUC-Oga-088574	Otolemur garnettii	37.39	3.00e-171	593.00
IUUC-Oar-089453	Ovis aries	37.01	1.00e-173	602.00
IUUC-Ptr-090694	Pan troglodytes	37.95	2.00e-174	604.00
IUUC-Pan-092420	Papio anubis	37.69	2.00e-175	608.00
IUUC-Psi-093683	Pelodiscus sinensis	36.71	1.00e-166	578.00
IUUC-Pno-094783	Phaeosphaeria nodorum	56.35	0.00e+00	1096.00
IUUC-Ppa-095208	Physcomitrella patens	35.78	4.00e-153	533.00
IUUC-Pfo-096299	Poecilia formosa	37.18	2.00e-178	617.00
IUUC-Pab-098706	Pongo abelii	38.34	2.00e-176	611.00
IUUC-Pop-099275	Populus trichocarpa	37.39	5.00e-157	546.00
IUUC-Pca-100796	Procavia capensis	31.19	5.00e-104	370.00
IUUC-Ppe-101861	Prunus persica	38.00	8.00e-158	549.00
IUUC-Pva-103241	Pteropus vampyrus	39.54	9.00e-158	549.00
IUUC-Pgr-103432	Puccinia graminis	41.49	0.00e+00	660.00
IUUC-Ptt-103742	Puccinia triticina	37.71	2.00e-170	591.00
IUUC-Pte-104069	Pyrenophora teres	59.75	0.00e+00	1097.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	59.64	0.00e+00	1126.00
IUUC-Rno-105219	Rattus norvegicus	36.81	1.00e-169	588.00
IUUC-Sce-106271	Saccharomyces cerevisiae	44.83	0.00e+00	769.00
IUUC-Sha-107550	Sarcophilus harrisii	37.32	1.00e-172	598.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	44.17	0.00e+00	754.00
IUUC-Spo-108239	Schizosaccharomyces pombe	43.51	0.00e+00	765.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	69.76	0.00e+00	1331.00
IUUC-Smo-109477	Selaginella moellendorffii	36.82	3.00e-155	540.00
IUUC-Sit-110000	Setaria italica	35.66	2.00e-134	471.00
IUUC-Sly-111595	Solanum lycopersicum	37.15	1.00e-159	555.00
IUUC-Stu-112516	Solanum tuberosum	36.49	4.00e-156	543.00
IUUC-Sar-113195	Sorex araneus	43.19	6.00e-121	426.00
IUUC-Sbi-114465	Sorghum bicolor	34.98	5.00e-147	513.00
IUUC-Sre-115006	Sporisorium reilianum	40.28	0.00e+00	681.00
IUUC-Ssc-115929	Sus scrofa	37.47	2.00e-170	591.00
IUUC-Tgu-117282	Taeniopygia guttata	36.61	3.00e-165	574.00
IUUC-Tru-118406	Takifugu rubripes	37.47	1.00e-170	592.00
IUUC-Tsy-119170	Tarsius syrichta	37.04	1.00e-167	582.00
IUUC-Tni-119721	Tetraodon nigroviridis	37.98	9.00e-169	585.00
IUUC-Tca-121761	Theobroma cacao	37.20	3.00e-163	567.00
IUUC-Tre-121908	Trichoderma reesei	94.91	0.00e+00	1677.00
IUUC-Tae-125433	Triticum aestivum	36.33	3.00e-141	494.00
IUUC-Tur-126811	Triticum urartu	37.41	4.00e-142	497.00
IUUC-Tme-126987	Tuber melanosporum	58.51	0.00e+00	1139.00
IUUC-Tbe-127315	Tupaia belangeri	45.30	3.00e-113	401.00
IUUC-Ttr-129165	Tursiops truncatus	30.38	7.00e-118	416.00
IUUC-Uma-129651	Ustilago maydis	40.33	0.00e+00	687.00
IUUC-Vda-129973	Verticillium dahliae	78.62	0.00e+00	1465.00
IUUC-Vpa-130163	Vicugna pacos	31.20	5.00e-57	214.00
IUUC-Vvi-131402	Vitis vinifera	36.75	2.00e-158	551.00
IUUC-Xtr-132296	Xenopus tropicalis	36.96	6.00e-169	586.00
IUUC-Xma-133028	Xiphophorus maculatus	37.59	0.00e+00	629.00
IUUC-Yli-134484	Yarrowia lipolytica	45.91	0.00e+00	779.00
IUUC-Zma-135938	Zea mays	34.19	3.00e-145	508.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence