iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078887

Ensembl Protein ID

OGLUM02G07020.1

UniProt Accession

A0A0D9YNL7; A0A0D9YNL7_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM02G07020	OGLUM02G07020.1	OGLUM02G07020.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	5.80e-09	37.1	1099	1144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkC 51
           vC+vCg   +d+ s++ C+kC++ +H  Cl+++     p+ + w+Cp+C
   Q: 1099 VCKVCGIDRDDD-SVLLCDKCDSEYHTYCLNPP-LARIPEGN-WYCPSC 1144
           8******99987.7*******************.*******6.****** PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MPPPPPPPGP PGARRPRATA NEDWICPECE MRGARTNRWK LGPVPLDINV PPPSTPDAED 60
PVAVATRDVT RTNAADGAHL TEFAVQLPHF EGLHLKNTAL YDGNQFMPAF GLAHCLSMRQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGAGGGTGG CGGCGGCGAG CGCGATCGAG TCGGTGACGG CGAGGGCGCC GCCGTTCGGG 60
CCGCCGGCGG CGCGGCACCC GGGGGAGGCA GGGCGTGGGA ACCCGCCGCC CCCGTGCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001487--Bromodomain
IPR003889--FYrich_C
IPR003888--FYrich_N
IPR028942--WHIM1_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50014--BROMODOMAIN_2
PS51543--FYRC
PS51542--FYRN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00439--Bromodomain
PF00628--PHD
PF15612--WHIM1

SMART

SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0009506--C:plasmodesma
GO:0004402--F:histone acetyltransferase activity
GO:0008270--F:zinc ion binding
GO:0043966--P:histone H3 acetylation
GO:0043967--P:histone H4 acetylation
GO:0048573--P:photoperiodism, flowering
GO:0006355--P:regulation of transcription, DNA-templated
GO:0010223--P:secondary shoot formation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000077	Aegilops tauschii	73.75	0.00e+00	1398.00
IUUC-Atr-002838	Amborella trichopoda	39.73	0.00e+00	1191.00
IUUC-Aly-006097	Arabidopsis lyrata	38.76	0.00e+00	1025.00
IUUC-Ath-007218	Arabidopsis thaliana	38.45	0.00e+00	994.00
IUUC-Bdi-014742	Brachypodium distachyon	74.05	0.00e+00	1347.00
IUUC-Bol-015336	Brassica oleracea	37.91	0.00e+00	1072.00
IUUC-Bra-017998	Brassica rapa	35.73	0.00e+00	1036.00
IUUC-Cre-022637	Chlamydomonas reinhardtii	50.00	5.00e-08	48.10
IUUC-Fox-037887	Fusarium oxysporum	46.67	4.00e-09	56.20
IUUC-Gma-042778	Glycine max	41.65	0.00e+00	1202.00
IUUC-Hvu-047583	Hordeum vulgare	63.99	0.00e+00	1159.00
IUUC-Lpe-050785	Leersia perrieri	87.45	0.00e+00	3385.00
IUUC-Mtr-058285	Medicago truncatula	39.98	0.00e+00	1156.00
IUUC-Mac-065069	Musa acuminata	45.18	0.00e+00	1180.00
IUUC-Oba-075854	Oryza barthii	98.67	0.00e+00	3980.00
IUUC-Obr-076343	Oryza brachyantha	90.50	0.00e+00	3470.00
IUUC-Ogl-077886	Oryza glaberrima	99.80	0.00e+00	1997.00
IUUC-Olo-080668	Oryza longistaminata	99.58	0.00e+00	3897.00
IUUC-Ome-081800	Oryza meridionalis	99.31	0.00e+00	3872.00
IUUC-Oni-082593	Oryza nivara	99.95	0.00e+00	3907.00
IUUC-Opu-083363	Oryza punctata	97.68	0.00e+00	3903.00
IUUC-Oru-084298	Oryza rufipogon	99.68	0.00e+00	3859.00
IUUC-Osa-085487	Oryza sativa	99.58	0.00e+00	1917.00
IUUC-Ppa-095893	Physcomitrella patens	39.86	6.00e-105	376.00
IUUC-Ppe-101198	Prunus persica	42.20	0.00e+00	1283.00
IUUC-Sit-110633	Setaria italica	72.67	0.00e+00	2702.00
IUUC-Tca-121595	Theobroma cacao	39.89	0.00e+00	1231.00
IUUC-Tae-123821	Triticum aestivum	69.96	0.00e+00	2730.00
IUUC-Tur-126242	Triticum urartu	73.20	0.00e+00	1431.00
IUUC-Vda-129876	Verticillium dahliae	45.65	2.00e-09	57.40
IUUC-Vvi-130929	Vitis vinifera	41.97	0.00e+00	1013.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence