iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oni-082090

Ensembl Protein ID

ONIVA05G00310.1

UniProt Accession

A0A0E0H8B6; A0A0E0H8B6_ORYNI

Protein Name

Eukaryotic translation initiation factor 3 subunit F; eIF-3-epsilon

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ONIVA05G00310	ONIVA05G00310.1	ONIVA05G00310.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	38.93	4.00e-49	192.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryza nivara

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MAAAEGPVLL FPSTSSMSAR VEAVVVFNIC DSYVRRPDQA ERVIGTLLGS VLPDGTVHVR 60
NSYVVPHNES PDQVALDIEY HHNMYASHHK VNPKEVIVGW FSTGFGVSGG STLIHDFYSR 120

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Nucleotide Sequence
(Fasta)

ATGGCTGCGG CGGAGGGCCC CGTTCTCCTC TTCCCCTCTA CCTCGTCGAT GTCCGCCCGG 60
GTGGAGGCGG TCGTCGTGTT CAACATCTGC GACAGCTACG TGCGCCGCCC CGACCAGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0005829--C:cytosol
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0016020--C:membrane
GO:0005634--C:nucleus
GO:0003743--F:translation initiation factor activity
GO:0009793--P:embryo development ending in seed dormancy
GO:0001731--P:formation of translation preinitiation complex
GO:0009846--P:pollen germination
GO:0006446--P:regulation of translational initiation
GO:0009744--P:response to sucrose

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	77.99	4.00e-128	450.00
IUUC-Aml-001527	Ailuropoda melanoleuca	39.54	2.00e-55	208.00
IUUC-Atr-002686	Amborella trichopoda	70.42	6.00e-107	379.00
IUUC-Apl-003977	Anas platyrhynchos	37.56	4.00e-46	177.00
IUUC-Aca-004335	Anolis carolinensis	38.87	8.00e-57	213.00
IUUC-Aly-005945	Arabidopsis lyrata	72.83	7.00e-111	392.00
IUUC-Ath-007045	Arabidopsis thaliana	72.45	2.00e-109	387.00
IUUC-Acl-008365	Aspergillus clavatus	35.03	2.00e-45	176.00
IUUC-Afl-008742	Aspergillus flavus	34.97	6.00e-44	170.00
IUUC-Afu-009030	Aspergillus fumigatus	35.52	3.00e-46	178.00
IUUC-Ani-009212	Aspergillus nidulans	35.84	2.00e-45	175.00
IUUC-Ang-009712	Aspergillus niger	35.03	1.00e-44	173.00
IUUC-Aor-009885	Aspergillus oryzae	35.31	8.00e-45	173.00
IUUC-Ate-010315	Aspergillus terreus	35.17	3.00e-44	171.00
IUUC-Ame-010801	Astyanax mexicanus	47.00	4.00e-20	91.30
IUUC-Bgr-011982	Blumeria graminis	34.27	6.00e-43	167.00
IUUC-Bta-012804	Bos taurus	38.99	1.00e-56	212.00
IUUC-Bci-013891	Botrytis cinerea	33.22	3.00e-36	145.00
IUUC-Bdi-014328	Brachypodium distachyon	84.84	6.00e-129	452.00
IUUC-Bol-015446	Brassica oleracea	72.06	3.00e-114	404.00
IUUC-Bra-016862	Brassica rapa	71.32	8.00e-113	399.00
IUUC-Cel-018171	Caenorhabditis elegans	27.80	1.00e-27	115.00
IUUC-Cja-019335	Callithrix jacchus	39.54	2.00e-55	208.00
IUUC-Cfa-020138	Canis familiaris	39.16	6.00e-55	206.00
IUUC-Cpo-022109	Cavia porcellus	36.67	3.00e-45	175.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	42.76	2.00e-64	238.00
IUUC-Csa-023994	Chlorocebus sabaeus	39.54	3.00e-55	208.00
IUUC-Cho-024351	Choloepus hoffmanni	29.66	2.00e-30	126.00
IUUC-Cin-025801	Ciona intestinalis	38.64	1.00e-52	199.00
IUUC-Csv-025805	Ciona savignyi	39.02	9.00e-53	199.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	28.96	3.00e-33	135.00
IUUC-Cne-026868	Cryptococcus neoformans	27.89	1.00e-21	96.30
IUUC-Cme-027328	Cyanidioschyzon merolae	25.56	7.00e-20	90.50
IUUC-Dre-028085	Danio rerio	37.94	5.00e-55	207.00
IUUC-Dno-030099	Dasypus novemcinctus	39.54	4.00e-55	207.00
IUUC-Dor-030324	Dipodomys ordii	34.98	6.00e-45	174.00
IUUC-Dse-031314	Dothistroma septosporum	33.92	4.00e-44	171.00
IUUC-Dme-031926	Drosophila melanogaster	37.23	5.00e-51	193.00
IUUC-Ete-032569	Echinops telfairi	38.18	4.00e-52	197.00
IUUC-Eca-033502	Equus caballus	36.82	4.00e-50	191.00
IUUC-Eeu-034883	Erinaceus europaeus	31.32	2.00e-24	104.00
IUUC-Fca-035873	Felis catus	39.54	2.00e-55	208.00
IUUC-Fal-036921	Ficedula albicollis	39.92	2.00e-56	211.00
IUUC-Fox-037765	Fusarium oxysporum	30.00	1.00e-28	120.00
IUUC-Fso-038240	Fusarium solani	30.36	1.00e-29	123.00
IUUC-Gmo-038864	Gadus morhua	38.49	2.00e-56	211.00
IUUC-Ggr-039862	Gaeumannomyces graminis	29.33	6.00e-29	120.00
IUUC-Gga-040952	Gallus gallus	39.92	2.00e-56	211.00
IUUC-Gac-041677	Gasterosteus aculeatus	40.93	1.00e-60	225.00
IUUC-Gma-043061	Glycine max	74.74	8.00e-110	389.00
IUUC-Ggo-045591	Gorilla gorilla	39.54	3.00e-55	208.00
IUUC-Hsa-046860	Homo sapiens	39.54	3.00e-55	208.00
IUUC-Hvu-047410	Hordeum vulgare	86.49	5.00e-75	272.00
IUUC-Itr-048211	Ictidomys tridecemlineatus	39.92	8.00e-56	210.00
IUUC-Lch-049410	Latimeria chalumnae	36.95	6.00e-34	136.00
IUUC-Lpe-051102	Leersia perrieri	96.47	7.00e-143	498.00
IUUC-Loc-052016	Lepisosteus oculatus	36.88	1.00e-46	179.00
IUUC-Lma-053157	Leptosphaeria maculans	33.91	2.00e-45	176.00
IUUC-Laf-054568	Loxodonta africana	39.54	5.00e-55	207.00
IUUC-Mcc-054613	Macaca mulatta	39.54	2.00e-55	208.00
IUUC-Meu-056832	Macropus eugenii	22.71	4.00e-17	80.50
IUUC-Mor-057104	Magnaporthe oryzae	30.04	5.00e-31	127.00
IUUC-Mtr-058445	Medicago truncatula	78.20	4.00e-126	443.00
IUUC-Mla-059038	Melampsora laricipopulina	30.21	4.00e-32	131.00
IUUC-Mga-059548	Meleagris gallopavo	38.33	2.00e-48	185.00
IUUC-Mvi-060520	Microbotryum violaceum	25.59	4.00e-19	88.20
IUUC-Mdo-062376	Monodelphis domestica	39.16	4.00e-56	211.00
IUUC-Mmu-063254	Mus musculus	39.92	5.00e-56	211.00
IUUC-Mac-065635	Musa acuminata	71.68	5.00e-114	403.00
IUUC-Mpu-066314	Mustela putorius furo	39.54	2.00e-55	208.00
IUUC-Mlu-067512	Myotis lucifugus	39.54	9.00e-56	209.00
IUUC-Nfi-068262	Neosartorya fischeri	35.52	2.00e-46	178.00
IUUC-Ncr-068872	Neurospora crassa	31.47	4.00e-33	134.00
IUUC-Nle-070118	Nomascus leucogenys	39.54	2.00e-55	208.00
IUUC-Opr-071228	Ochotona princeps	37.89	7.00e-48	182.00
IUUC-Ont-072600	Oreochromis niloticus	39.16	1.00e-58	218.00
IUUC-Oan-073584	Ornithorhynchus anatinus	37.89	3.00e-48	184.00
IUUC-Ocu-074542	Oryctolagus cuniculus	39.54	8.00e-56	210.00
IUUC-Oba-075923	Oryza barthii	99.65	6.00e-156	542.00
IUUC-Obr-076313	Oryza brachyantha	97.54	3.00e-144	503.00
IUUC-Ogl-076932	Oryza glaberrima	99.65	6.00e-156	542.00
IUUC-Ogu-078152	Oryza glumaepatula	99.65	6.00e-156	542.00
IUUC-Oin-079528	Oryza indica	99.65	6.00e-156	542.00
IUUC-Olo-080401	Oryza longistaminata	99.65	6.00e-156	542.00
IUUC-Ome-081553	Oryza meridionalis	99.30	2.00e-155	540.00
IUUC-Opu-083583	Oryza punctata	98.59	4.00e-146	509.00
IUUC-Oru-084492	Oryza rufipogon	99.65	6.00e-156	542.00
IUUC-Osa-085383	Oryza sativa	99.65	6.00e-156	542.00
IUUC-Ola-086835	Oryzias latipes	39.92	1.00e-58	219.00
IUUC-Olu-087716	Ostreococcus lucimarinus	35.58	1.00e-41	162.00
IUUC-Oga-088886	Otolemur garnettii	39.16	3.00e-55	208.00
IUUC-Oar-090079	Ovis aries	38.99	1.00e-56	212.00
IUUC-Ptr-091457	Pan troglodytes	39.54	3.00e-55	208.00
IUUC-Pan-092317	Papio anubis	33.52	2.00e-30	124.00
IUUC-Psi-093129	Pelodiscus sinensis	36.58	7.00e-50	190.00
IUUC-Pma-094488	Petromyzon marinus	40.30	1.00e-59	222.00
IUUC-Pno-095049	Phaeosphaeria nodorum	34.26	5.00e-47	181.00
IUUC-Ppa-095341	Physcomitrella patens	57.91	1.00e-100	358.00
IUUC-Pfo-096286	Poecilia formosa	38.63	2.00e-59	221.00
IUUC-Pab-097765	Pongo abelii	39.54	3.00e-55	208.00
IUUC-Pop-099131	Populus trichocarpa	74.22	5.00e-120	423.00
IUUC-Pca-100524	Procavia capensis	30.53	1.00e-30	125.00
IUUC-Ppe-101934	Prunus persica	74.48	2.00e-126	444.00
IUUC-Pva-102577	Pteropus vampyrus	39.92	7.00e-56	210.00
IUUC-Pgr-103521	Puccinia graminis	29.35	8.00e-32	130.00
IUUC-Pte-104304	Pyrenophora teres	33.91	1.00e-46	179.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	33.91	2.00e-46	178.00
IUUC-Rno-105717	Rattus norvegicus	39.92	4.00e-56	211.00
IUUC-Sha-107190	Sarcophilus harrisii	39.38	3.00e-55	208.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	33.33	2.00e-40	158.00
IUUC-Spo-108355	Schizosaccharomyces pombe	32.16	3.00e-40	158.00
IUUC-Smo-109374	Selaginella moellendorffii	61.48	1.00e-104	371.00
IUUC-Sit-110119	Setaria italica	92.08	6.00e-136	475.00
IUUC-Sly-111570	Solanum lycopersicum	72.28	7.00e-107	379.00
IUUC-Stu-112308	Solanum tuberosum	72.98	1.00e-116	411.00
IUUC-Sar-113515	Sorex araneus	34.74	9.00e-14	69.30
IUUC-Sbi-114605	Sorghum bicolor	87.20	1.00e-134	472.00
IUUC-Sre-114906	Sporisorium reilianum	35.04	9.00e-42	163.00
IUUC-Tgu-117087	Taeniopygia guttata	37.89	3.00e-48	184.00
IUUC-Tru-117700	Takifugu rubripes	40.30	1.00e-60	226.00
IUUC-Tni-120470	Tetraodon nigroviridis	39.54	2.00e-58	218.00
IUUC-Tca-121109	Theobroma cacao	75.87	5.00e-114	403.00
IUUC-Tre-122095	Trichoderma reesei	30.60	7.00e-30	124.00
IUUC-Tvi-122580	Trichoderma virens	30.25	4.00e-29	121.00
IUUC-Tae-125129	Triticum aestivum	86.67	3.00e-135	473.00
IUUC-Tur-126658	Triticum urartu	77.32	2.00e-119	421.00
IUUC-Tme-127043	Tuber melanosporum	34.71	1.00e-44	172.00
IUUC-Tbe-127927	Tupaia belangeri	39.54	2.00e-55	208.00
IUUC-Ttr-129231	Tursiops truncatus	39.54	2.00e-55	209.00
IUUC-Uma-129578	Ustilago maydis	34.67	5.00e-40	157.00
IUUC-Vda-129730	Verticillium dahliae	28.91	7.00e-33	134.00
IUUC-Vpa-130677	Vicugna pacos	45.95	1.40e-02	33.50
IUUC-Vvi-130968	Vitis vinifera	74.65	2.00e-120	424.00
IUUC-Xtr-132203	Xenopus tropicalis	39.16	1.00e-53	202.00
IUUC-Xma-133972	Xiphophorus maculatus	38.78	6.00e-58	216.00
IUUC-Yli-134553	Yarrowia lipolytica	31.87	3.00e-33	135.00
IUUC-Zma-134941	Zea mays	88.68	1.00e-122	431.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence