iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098851

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000351

Gene Name

POPTR_0015s04290g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0015s04290	POPTR_0015s04290.1	POPTR_0015s04290.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-31	108.4	231	262
UBD/Beta-Prp	4.60e-61	207.7	54	275

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH++s++++++ +d + +++ s D++ kvW++
   Q: 231  GHKGSIYAVSWsPDgKQVLTVSADKSAKVWEI 262
           8***********999***************96 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseD....rtikvwdlstgkcvhtlkg 92
           g+h  + t+  +sp+++++a++  +gt+++w + +  +l++  +  ++ + ++++spdg +++ +s D     +++ +  ++g+ v  + g
   Q: 54   GEHAYQATVARYSPNGEWIASADVSGTVRIWGAYNDHVLKKEfKVLTGRIDDLQWSPDG-LRIVASGDgkgkSLVRAFMWDSGTNVGEFDG 143
           56777889999********************988777765554***************9.999999999*999****************** PP
   S: 93   hedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tgght 180
           h+++vls++f p++  ++v+ ++d  ++ ++ +  +  +   + h+ +vnc++++pdg+ ++s s D++  l+d ktg+ + +l  + gh+
   Q: 144  HSRRVLSCAFKPTRpFRIVTCGEDFLVNFYEGPPFKFKS-SHRDHSNFVNCIRFSPDGSKFISVSSDKKGILFDGKTGEKIGELssEDGHK 233
           ************99899*******************999.********************************************99667** PP
   S: 181  dsvyslsfdsngkelvsgsldgtvklwdlq...tgecvrtln 219
           +s+y +s++++gk+++++s d++ k+w++    +g+  +tl+
   Q: 234  GSIYAVSWSPDGKQVLTVSADKSAKVWEICddgSGKLTKTLT 275
           ****************************98777777777766 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MTELAETYAC VPSTERGRGI LISGHPKTNK ILYTNNRSIL ILNLDNPLDV SVYGEHAYQA 60
TVARYSPNGE WIASADVSGT VRIWGAYNDH VLKKEFKVLT GRIDDLQWSP DGLRIVASGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCCACTAT CTCCATCAAA TCAAATCTGG AAAAGAAAAT GACAGAGCTC GCAGAAACCT 60
ACGCTTGCGT TCCCTCGACC GAACGAGGCA GAGGGATCCT GATTTCCGGT CATCCAAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0042643--C:actomyosin, actin portion
GO:0030864--C:cortical actin cytoskeleton
GO:0051015--F:actin filament binding
GO:0030042--P:actin filament depolymerization
GO:0030836--P:positive regulation of actin filament depolymerization

KEGG

pop:POPTR_0015s04290g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cin-025152	Ciona intestinalis	37.55	2.00e-50	191.00
IUUC-Cne-026814	Cryptococcus neoformans	30.68	5.00e-73	268.00
IUUC-Dme-031597	Drosophila melanogaster	39.18	8.00e-119	420.00
IUUC-Fox-037924	Fusarium oxysporum	35.12	2.00e-89	323.00
IUUC-Fso-038199	Fusarium solani	31.60	1.00e-81	296.00
IUUC-Kpa-049183	Komagataella pastoris	33.66	8.00e-76	277.00
IUUC-Mla-059103	Melampsora laricipopulina	32.46	2.00e-69	256.00
IUUC-Mvi-060448	Microbotryum violaceum	29.51	5.00e-60	224.00
IUUC-Ncr-068948	Neurospora crassa	32.74	1.00e-84	306.00
IUUC-Oan-073292	Ornithorhynchus anatinus	44.53	4.00e-33	133.00
IUUC-Ppa-095876	Physcomitrella patens	59.21	0.00e+00	762.00
IUUC-Pgr-103593	Puccinia graminis	30.93	5.00e-66	244.00
IUUC-Ssl-108408	Sclerotinia sclerotiorum	32.02	5.00e-82	298.00
IUUC-Sly-110897	Solanum lycopersicum	79.47	0.00e+00	1026.00
IUUC-Sre-114900	Sporisorium reilianum	32.95	6.00e-88	317.00
IUUC-Tvi-122528	Trichoderma virens	33.28	2.00e-84	306.00
IUUC-Uma-129631	Ustilago maydis	33.88	3.00e-94	338.00
IUUC-Vvi-131217	Vitis vinifera	83.91	0.00e+00	1052.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence