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Tag Content
iUUCD ID IUUC-Uma-129661
Ensembl Protein ID KIS69720
UniProt Accession Q4PCB8; A0A0D1E5R0; SEC13_USTMA
Genbank Protein ID KIS69720.1
Protein Name Protein transport protein SEC13
Genbank Nucleotide ID CM003144
Gene Name SEC13; UMAG_02245
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
UMAG_02245 KIS69720 KIS69720
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.60e-30 102.3 69 101
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd..tllvsGsdDgtikvWD 29
    gH+++v+ +a+ ++ ++l+s+s+Dg++ +W
   Q: 69 GHQGPVWQVAWahPTfgDILASCSYDGKVVIWK 101
    8************777799*************5 PP
   

Organism Ustilago maydis
Functional Description
(View)

Functional Description



     Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. It also functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors. SEC13 is required for efficient mRNA export from the nucleus to the cytoplasm and for correct nuclear pore biogenesis and distribution (By similarity).
Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. It also functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors. SEC13 is required for efficient mRNA export from the nucleus to the cytoplasm and for correct nuclear pore biogenesis and distribution (By similarity).
Protein Sequence
(Fasta)
MTTVTSSSAG LSLSAERPKN IETQHEDMVH DAQLDFYGKR LATCSSDRTV KVFDIVNGTP 60
STTAETLHGH QGPVWQVAWA HPTFGDILAS CSYDGKVVIW KDNGAGASIG ASAPYGSQSA 120
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Protein Fasta Sequence



>IUUC-Uma-129661|E3,WD_repeat|Ustilago maydis
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Nucleotide Sequence
(Fasta)
ATGACCACCG TCACATCGTC CTCTGCAGGG CTCTCGCTCT CTGCAGAACG ACCAAAGAAC 60
ATCGAGACTC AACACGAAGA CATGGTGCAC GATGCGCAAC TCGACTTCTA CGGCAAGCGT 120
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Nucleotide Fasta Sequence



>IUUC-Uma-129661|E3,WD_repeat|Ustilago maydis
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0968--Cytoplasmic vesicle
KW-0256--Endoplasmic reticulum
KW-0931--ER-Golgi transport
KW-0472--Membrane
KW-0509--mRNA transport
KW-0906--Nuclear pore complex
KW-0539--Nucleus
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0677--Repeat
KW-0811--Translocation
KW-0813--Transport
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005789--C:endoplasmic reticulum membrane
GO:0012507--C:ER to Golgi transport vesicle membrane
GO:0005643--C:nuclear pore
GO:0051028--P:mRNA transport
GO:0015031--P:protein transport
GO:0016192--P:vesicle-mediated transport

KEGG uma:UMAG_02245
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000671 Aegilops tauschii 46.11 2.00e-84 303.00
IUUC-Aml-001832 Ailuropoda melanoleuca 49.86 7.00e-94 335.00
IUUC-Atr-002825 Amborella trichopoda 48.70 1.00e-84 304.00
IUUC-Apl-003992 Anas platyrhynchos 50.30 8.00e-90 321.00
IUUC-Aca-005283 Anolis carolinensis 49.28 5.00e-93 332.00
IUUC-Aly-005654 Arabidopsis lyrata 45.95 6.00e-82 295.00
IUUC-Ath-006816 Arabidopsis thaliana 45.95 1.00e-81 294.00
IUUC-Ago-007827 Ashbya gossypii 46.36 1.00e-89 320.00
IUUC-Acl-008205 Aspergillus clavatus 50.15 5.00e-88 315.00
IUUC-Afl-008748 Aspergillus flavus 49.12 2.00e-87 313.00
IUUC-Afu-008791 Aspergillus fumigatus 48.96 8.00e-85 305.00
IUUC-Ani-009152 Aspergillus nidulans 49.71 8.00e-90 321.00
IUUC-Ang-009765 Aspergillus niger 49.71 1.00e-88 317.00
IUUC-Aor-009927 Aspergillus oryzae 48.81 1.00e-84 304.00
IUUC-Ate-010248 Aspergillus terreus 50.29 2.00e-88 317.00
IUUC-Ame-011478 Astyanax mexicanus 49.42 9.00e-93 331.00
IUUC-Bgr-012276 Blumeria graminis 48.96 9.00e-83 298.00
IUUC-Bta-012700 Bos taurus 49.57 1.00e-92 330.00
IUUC-Bci-013722 Botrytis cinerea 50.29 3.00e-87 312.00
IUUC-Bdi-014818 Brachypodium distachyon 46.97 4.00e-85 306.00
IUUC-Bol-015779 Brassica oleracea 47.69 9.00e-84 301.00
IUUC-Bra-017934 Brassica rapa 47.11 4.00e-83 299.00
IUUC-Cel-018479 Caenorhabditis elegans 35.09 7.00e-51 192.00
IUUC-Cja-019956 Callithrix jacchus 49.85 3.00e-85 306.00
IUUC-Cfa-020752 Canis familiaris 49.86 2.00e-93 333.00
IUUC-Cpo-021871 Cavia porcellus 50.14 1.00e-93 334.00
IUUC-Cre-022797 Chlamydomonas reinhardtii 47.23 4.00e-84 302.00
IUUC-Csa-023393 Chlorocebus sabaeus 49.57 1.00e-92 331.00
IUUC-Cho-024786 Choloepus hoffmanni 42.33 4.00e-32 130.00
IUUC-Cin-025332 Ciona intestinalis 49.13 4.00e-91 325.00
IUUC-Csv-025926 Ciona savignyi 49.42 2.00e-91 327.00
IUUC-Cgl-026413 Colletotrichum gloeosporioides 47.93 4.00e-78 282.00
IUUC-Cne-027054 Cryptococcus neoformans 52.59 2.00e-98 350.00
IUUC-Cme-027165 Cyanidioschyzon merolae 38.52 7.00e-52 197.00
IUUC-Dre-027782 Danio rerio 49.57 3.00e-92 329.00
IUUC-Dno-029628 Dasypus novemcinctus 49.57 2.00e-93 333.00
IUUC-Dor-030650 Dipodomys ordii 50.38 3.00e-72 263.00
IUUC-Dse-031206 Dothistroma septosporum 46.22 1.00e-79 288.00
IUUC-Dme-031854 Drosophila melanogaster 47.35 1.00e-81 295.00
IUUC-Ete-032618 Echinops telfairi 40.27 1.00e-39 155.00
IUUC-Eca-033268 Equus caballus 50.14 1.00e-93 333.00
IUUC-Fca-035918 Felis catus 49.86 2.00e-93 333.00
IUUC-Fal-037551 Ficedula albicollis 49.70 5.00e-85 305.00
IUUC-Fox-037763 Fusarium oxysporum 49.27 1.00e-84 304.00
IUUC-Fso-038341 Fusarium solani 49.13 3.00e-84 303.00
IUUC-Gmo-038638 Gadus morhua 49.42 3.00e-93 333.00
IUUC-Ggr-039865 Gaeumannomyces graminis 49.12 3.00e-83 299.00
IUUC-Gga-040193 Gallus gallus 50.43 3.00e-94 336.00
IUUC-Gac-041337 Gasterosteus aculeatus 30.23 5.00e-36 142.00
IUUC-Gma-044311 Glycine max 46.53 4.00e-82 296.00
IUUC-Ggo-045252 Gorilla gorilla 49.57 6.00e-93 332.00
IUUC-Hsa-046565 Homo sapiens 49.57 7.00e-93 332.00
IUUC-Hvu-047835 Hordeum vulgare 47.84 3.00e-87 313.00
IUUC-Itr-048587 Ictidomys tridecemlineatus 49.57 6.00e-93 332.00
IUUC-Kpa-049148 Komagataella pastoris 49.56 3.00e-94 336.00
IUUC-Lch-050421 Latimeria chalumnae 50.72 7.00e-95 338.00
IUUC-Lpe-051187 Leersia perrieri 46.69 1.00e-83 303.00
IUUC-Loc-052167 Lepisosteus oculatus 49.86 3.00e-95 339.00
IUUC-Lma-053250 Leptosphaeria maculans 50.15 6.00e-86 308.00
IUUC-Laf-054304 Loxodonta africana 49.86 7.00e-93 332.00
IUUC-Mcc-055519 Macaca mulatta 49.28 3.00e-92 330.00
IUUC-Meu-056439 Macropus eugenii 48.70 4.00e-92 329.00
IUUC-Mor-057241 Magnaporthe oryzae 48.38 2.00e-81 293.00
IUUC-Mpo-057373 Magnaporthe poae 38.82 1.00e-53 201.00
IUUC-Mtr-058412 Medicago truncatula 45.11 5.00e-81 292.00
IUUC-Mla-058966 Melampsora laricipopulina 57.43 6.00e-115 405.00
IUUC-Mga-060066 Meleagris gallopavo 50.30 8.00e-90 321.00
IUUC-Mvi-060290 Microbotryum violaceum 52.97 4.00e-98 352.00
IUUC-Mmr-060717 Microcebus murinus 49.57 3.00e-93 332.00
IUUC-Mdo-062496 Monodelphis domestica 48.99 3.00e-92 330.00
IUUC-Mmu-063490 Mus musculus 49.57 4.00e-93 332.00
IUUC-Mac-065307 Musa acuminata 47.18 8.00e-81 292.00
IUUC-Mpu-066601 Mustela putorius furo 49.86 2.00e-93 333.00
IUUC-Mlu-067501 Myotis lucifugus 49.86 2.00e-93 333.00
IUUC-Nfi-068360 Neosartorya fischeri 47.81 2.00e-69 253.00
IUUC-Ncr-068928 Neurospora crassa 49.56 3.00e-86 309.00
IUUC-Nle-069028 Nomascus leucogenys 49.28 9.00e-93 331.00
IUUC-Opr-070446 Ochotona princeps 49.40 1.00e-88 317.00
IUUC-Ont-071587 Oreochromis niloticus 50.58 1.00e-94 337.00
IUUC-Oan-073211 Ornithorhynchus anatinus 47.97 1.00e-91 327.00
IUUC-Ocu-074306 Oryctolagus cuniculus 49.57 3.00e-92 329.00
IUUC-Oba-075069 Oryza barthii 46.84 7.00e-84 301.00
IUUC-Obr-076667 Oryza brachyantha 46.97 6.00e-85 305.00
IUUC-Ogl-077208 Oryza glaberrima 46.84 7.00e-84 301.00
IUUC-Ogu-078513 Oryza glumaepatula 46.84 7.00e-84 301.00
IUUC-Oin-079094 Oryza indica 46.84 7.00e-84 301.00
IUUC-Olo-080473 Oryza longistaminata 46.84 7.00e-84 301.00
IUUC-Ome-081643 Oryza meridionalis 46.84 7.00e-84 301.00
IUUC-Oni-082589 Oryza nivara 46.84 7.00e-84 301.00
IUUC-Opu-083677 Oryza punctata 47.26 3.00e-84 303.00
IUUC-Oru-084537 Oryza rufipogon 46.84 7.00e-84 301.00
IUUC-Osa-085449 Oryza sativa 46.84 7.00e-84 301.00
IUUC-Ola-087226 Oryzias latipes 50.29 4.00e-94 336.00
IUUC-Olu-087893 Ostreococcus lucimarinus 42.51 1.00e-68 251.00
IUUC-Oga-088837 Otolemur garnettii 49.86 1.00e-92 331.00
IUUC-Oar-089594 Ovis aries 49.57 5.00e-93 332.00
IUUC-Ptr-091132 Pan troglodytes 49.57 1.00e-93 334.00
IUUC-Pan-092013 Papio anubis 29.30 3.00e-29 120.00
IUUC-Psi-093568 Pelodiscus sinensis 50.00 2.00e-90 323.00
IUUC-Pma-094172 Petromyzon marinus 42.37 7.00e-36 141.00
IUUC-Pno-094955 Phaeosphaeria nodorum 48.69 3.00e-84 303.00
IUUC-Ppa-095578 Physcomitrella patens 47.13 4.00e-82 296.00
IUUC-Pfo-096063 Poecilia formosa 50.87 2.00e-94 337.00
IUUC-Pab-098674 Pongo abelii 49.28 5.00e-92 329.00
IUUC-Pop-099402 Populus trichocarpa 45.24 2.00e-79 287.00
IUUC-Pca-100824 Procavia capensis 40.29 4.00e-66 243.00
IUUC-Ppe-101278 Prunus persica 45.95 3.00e-80 289.00
IUUC-Pva-103161 Pteropus vampyrus 46.96 1.00e-86 311.00
IUUC-Pgr-103573 Puccinia graminis 55.97 3.00e-108 382.00
IUUC-Ptt-103700 Puccinia triticina 55.26 1.00e-100 357.00
IUUC-Pte-104267 Pyrenophora teres 48.09 2.00e-83 300.00
IUUC-Pyt-104535 Pyrenophora triticirepentis 45.45 2.00e-76 277.00
IUUC-Rno-104833 Rattus norvegicus 49.57 5.00e-93 332.00
IUUC-Sce-106437 Saccharomyces cerevisiae 48.25 5.00e-83 298.00
IUUC-Sha-106611 Sarcophilus harrisii 48.70 4.00e-92 329.00
IUUC-Sja-107654 Schizosaccharomyces japonicus 48.10 9.00e-90 321.00
IUUC-Spo-108362 Schizosaccharomyces pombe 49.12 2.00e-90 323.00
IUUC-Smo-109674 Selaginella moellendorffii 45.80 2.00e-81 294.00
IUUC-Sit-110132 Setaria italica 47.26 2.00e-85 306.00
IUUC-Sly-111852 Solanum lycopersicum 46.24 1.00e-81 294.00
IUUC-Stu-112195 Solanum tuberosum 46.82 1.00e-82 297.00
IUUC-Sar-113279 Sorex araneus 29.45 4.00e-26 110.00
IUUC-Sbi-114229 Sorghum bicolor 47.84 4.00e-86 309.00
IUUC-Sre-114898 Sporisorium reilianum 89.70 9.00e-170 587.00
IUUC-Ssc-115995 Sus scrofa 52.66 4.00e-47 178.00
IUUC-Tgu-116793 Taeniopygia guttata 49.86 2.00e-88 317.00
IUUC-Tru-117797 Takifugu rubripes 50.29 2.00e-93 333.00
IUUC-Tsy-118913 Tarsius syrichta 29.11 6.00e-24 103.00
IUUC-Tni-120366 Tetraodon nigroviridis 50.29 5.00e-93 332.00
IUUC-Tca-121242 Theobroma cacao 45.38 4.00e-79 286.00
IUUC-Tre-121899 Trichoderma reesei 49.85 2.00e-87 313.00
IUUC-Tvi-122380 Trichoderma virens 50.15 2.00e-86 310.00
IUUC-Tae-123998 Triticum aestivum 48.41 4.00e-88 316.00
IUUC-Tur-126202 Triticum urartu 48.13 7.00e-88 315.00
IUUC-Tme-127181 Tuber melanosporum 50.15 2.00e-91 327.00
IUUC-Ttr-128448 Tursiops truncatus 47.97 2.00e-73 267.00
IUUC-Vda-129666 Verticillium dahliae 49.41 1.00e-83 300.00
IUUC-Vpa-130318 Vicugna pacos 49.86 7.00e-93 332.00
IUUC-Vvi-131662 Vitis vinifera 46.53 1.00e-81 294.00
IUUC-Xtr-131859 Xenopus tropicalis 49.86 7.00e-94 335.00
IUUC-Xma-133898 Xiphophorus maculatus 50.87 2.00e-94 337.00
IUUC-Yli-134559 Yarrowia lipolytica 49.85 2.00e-86 310.00
Created Date 25-Jun-2017

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