iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114711

Ensembl Protein ID

Sb03g041890.1

UniProt Accession

C5XEL3; C5XEL3_SORBI

Genbank Protein ID

EES01867.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G379400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g041890	Sb03g041890.1	Sb03g041890.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.00e-13	52.1	74	120

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           C vC   ++d+ +++ C++C++++H  Cl+++ ++++p++  w C  C++
   Q: 74   CRVCLCDTDDD-KIILCDCCDQAYHLYCLSPP-KTKVPTKY-WDCDPCKK 120
           99999888877.6*******************.*******5.******86 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAPSQLPELE LSPTAIFTRC KVCGGCEEKD KRFLVCSHSE CFYKYYHVRC LTKEQIASDV 60
QMGSQLWYCP SCLCRVCLCD TDDDKIILCD CCDQAYHLYC LSPPKTKVPT KYWDCDPCKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGCATGCTC TGCTATGCTA GAAGCTCCGC GTTCCGGTCG GTGAACGCCA CTGCCGCCGC 60
GAGCTCAGCT CACCTCCGAC GGCACAGAAC GAAGCCACTG CCGCACCCGA GGCAACCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0005886--C:plasma membrane
GO:0004674--F:protein serine/threonine kinase activity
GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_03g041850

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Fox-037694	Fusarium oxysporum	44.44	6.00e-03	36.60
IUUC-Gac-042436	Gasterosteus aculeatus	34.00	3.00e-11	65.90
IUUC-Meu-056874	Macropus eugenii	48.00	8.00e-03	33.90
IUUC-Ont-071881	Oreochromis niloticus	33.33	2.00e-09	59.70
IUUC-Oan-073663	Ornithorhynchus anatinus	36.00	2.00e-10	62.80
IUUC-Pno-094879	Phaeosphaeria nodorum	57.14	1.00e-07	52.00
IUUC-Pfo-097525	Poecilia formosa	35.00	4.00e-11	65.50
IUUC-Tru-117922	Takifugu rubripes	35.00	8.00e-12	67.80
IUUC-Zma-135102	Zea mays	72.94	1.00e-50	191.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence