iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111762

Ensembl Protein ID

Solyc07g053660.2.1

UniProt Accession

K4CFR1; K4CFR1_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc07g053660.2	Solyc07g053660.2.1	Solyc07g053660.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-30	103.7	107	138

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH++ v++l   +d ++lvs++ D+t+++W +
   Q: 107  GHQGAVRGLTVsTDgRILVSCGTDCTVRLWKV 138
           8********99988899*************97 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MRLKVISRST DDFTRERSQD LQRVFRNFDP SLRHQEKAVE YVRALNAVKL EKIFARPFVG 60
AMDGHIDAVS CMAKNPNHLK GIFSGSMDGD VRLWDLATRR TVRQFPGHQG AVRGLTVSTD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGTTGA AAGTTATATC TCGGTCTACG GATGATTTTA CTCGTGAACG CAGTCAGGAC 60
CTTCAGGTTT GGCCACCCTT ACTTGTGTTG GGGAAATGTG CTTTCATACT ATGTATCACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007287--Sof1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04158--Sof1
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

sly:101251902

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002178	Ailuropoda melanoleuca	46.02	4.00e-126	443.00
IUUC-Atr-002799	Amborella trichopoda	72.79	0.00e+00	717.00
IUUC-Apl-003675	Anas platyrhynchos	46.74	3.00e-120	424.00
IUUC-Aca-004792	Anolis carolinensis	48.01	1.00e-132	465.00
IUUC-Aly-005998	Arabidopsis lyrata	78.32	0.00e+00	766.00
IUUC-Ath-007526	Arabidopsis thaliana	78.32	0.00e+00	764.00
IUUC-Ago-007774	Ashbya gossypii	44.32	6.00e-110	390.00
IUUC-Acl-008024	Aspergillus clavatus	42.54	8.00e-105	373.00
IUUC-Afu-008930	Aspergillus fumigatus	40.76	5.00e-100	357.00
IUUC-Ani-009370	Aspergillus nidulans	41.94	9.00e-104	369.00
IUUC-Ang-009827	Aspergillus niger	42.38	5.00e-103	367.00
IUUC-Aor-010060	Aspergillus oryzae	40.96	8.00e-96	343.00
IUUC-Ate-010434	Aspergillus terreus	45.14	4.00e-89	320.00
IUUC-Ame-011967	Astyanax mexicanus	46.62	4.00e-121	427.00
IUUC-Bgr-011989	Blumeria graminis	40.93	9.00e-100	356.00
IUUC-Bta-013291	Bos taurus	35.34	4.00e-82	297.00
IUUC-Bci-013868	Botrytis cinerea	39.65	5.00e-97	347.00
IUUC-Bdi-014343	Brachypodium distachyon	73.45	0.00e+00	710.00
IUUC-Bol-015740	Brassica oleracea	75.88	0.00e+00	706.00
IUUC-Bra-016689	Brassica rapa	75.66	0.00e+00	702.00
IUUC-Cel-018536	Caenorhabditis elegans	38.41	3.00e-92	331.00
IUUC-Cja-018779	Callithrix jacchus	46.68	1.00e-129	455.00
IUUC-Cfa-020105	Canis familiaris	46.90	7.00e-130	456.00
IUUC-Cpo-021538	Cavia porcellus	46.24	2.00e-125	441.00
IUUC-Cre-022798	Chlamydomonas reinhardtii	63.19	5.00e-59	219.00
IUUC-Csa-023492	Chlorocebus sabaeus	46.90	6.00e-130	456.00
IUUC-Cho-024497	Choloepus hoffmanni	41.23	5.00e-73	267.00
IUUC-Cin-025524	Ciona intestinalis	48.55	2.00e-132	464.00
IUUC-Csv-026197	Ciona savignyi	48.33	6.00e-131	459.00
IUUC-Cgl-026745	Colletotrichum gloeosporioides	39.34	5.00e-90	323.00
IUUC-Cne-026840	Cryptococcus neoformans	33.27	5.00e-70	259.00
IUUC-Cme-027111	Cyanidioschyzon merolae	33.94	3.00e-74	271.00
IUUC-Dre-027471	Danio rerio	48.05	5.00e-127	446.00
IUUC-Dno-029790	Dasypus novemcinctus	48.32	2.00e-105	374.00
IUUC-Dor-030971	Dipodomys ordii	37.83	2.00e-92	332.00
IUUC-Dse-031563	Dothistroma septosporum	41.85	1.00e-97	349.00
IUUC-Dme-032161	Drosophila melanogaster	43.29	3.00e-113	400.00
IUUC-Ete-033127	Echinops telfairi	44.27	3.00e-118	417.00
IUUC-Eca-033531	Equus caballus	46.64	3.00e-121	427.00
IUUC-Eeu-034663	Erinaceus europaeus	41.45	2.00e-105	375.00
IUUC-Fca-036258	Felis catus	46.90	5.00e-130	456.00
IUUC-Fal-037456	Ficedula albicollis	47.79	5.00e-126	443.00
IUUC-Fox-038025	Fusarium oxysporum	40.97	4.00e-93	334.00
IUUC-Fso-038344	Fusarium solani	41.36	4.00e-88	317.00
IUUC-Gmo-039643	Gadus morhua	46.46	8.00e-125	439.00
IUUC-Ggr-039816	Gaeumannomyces graminis	40.23	4.00e-92	330.00
IUUC-Gga-040143	Gallus gallus	49.12	2.00e-130	457.00
IUUC-Gac-041665	Gasterosteus aculeatus	48.97	9.00e-133	466.00
IUUC-Gma-043073	Glycine max	79.20	0.00e+00	768.00
IUUC-Ggo-045058	Gorilla gorilla	46.68	1.00e-129	456.00
IUUC-Hsa-046843	Homo sapiens	46.46	8.00e-129	453.00
IUUC-Hvu-047654	Hordeum vulgare	68.39	2.00e-119	421.00
IUUC-Itr-048822	Ictidomys tridecemlineatus	46.46	2.00e-129	454.00
IUUC-Kpa-049232	Komagataella pastoris	42.23	1.00e-111	395.00
IUUC-Lch-050542	Latimeria chalumnae	45.05	2.00e-130	458.00
IUUC-Lpe-051622	Leersia perrieri	74.56	0.00e+00	723.00
IUUC-Loc-052674	Lepisosteus oculatus	47.70	4.00e-133	466.00
IUUC-Lma-053108	Leptosphaeria maculans	41.50	2.00e-99	355.00
IUUC-Laf-053385	Loxodonta africana	46.24	2.00e-126	444.00
IUUC-Mcc-055151	Macaca mulatta	46.90	1.00e-129	455.00
IUUC-Meu-056230	Macropus eugenii	44.50	2.00e-56	212.00
IUUC-Mor-057013	Magnaporthe oryzae	38.23	4.00e-90	324.00
IUUC-Mpo-057530	Magnaporthe poae	40.23	2.00e-92	332.00
IUUC-Mtr-058187	Medicago truncatula	78.32	0.00e+00	746.00
IUUC-Mla-058964	Melampsora laricipopulina	35.59	8.00e-84	303.00
IUUC-Mga-059712	Meleagris gallopavo	47.92	2.00e-121	427.00
IUUC-Mvi-060370	Microbotryum violaceum	36.47	9.00e-64	236.00
IUUC-Mmr-061340	Microcebus murinus	44.47	6.00e-119	420.00
IUUC-Mdo-062978	Monodelphis domestica	47.14	4.00e-129	453.00
IUUC-Mmu-063439	Mus musculus	46.90	1.00e-130	459.00
IUUC-Mac-065129	Musa acuminata	76.11	0.00e+00	759.00
IUUC-Mpu-066548	Mustela putorius furo	42.44	1.00e-96	345.00
IUUC-Mlu-067660	Myotis lucifugus	46.24	2.00e-128	451.00
IUUC-Nfi-068455	Neosartorya fischeri	41.81	4.00e-103	367.00
IUUC-Ncr-068848	Neurospora crassa	38.95	3.00e-92	331.00
IUUC-Nle-069923	Nomascus leucogenys	46.68	5.00e-129	454.00
IUUC-Opr-070279	Ochotona princeps	38.54	2.00e-38	152.00
IUUC-Ont-072234	Oreochromis niloticus	49.33	5.00e-136	476.00
IUUC-Oan-073713	Ornithorhynchus anatinus	41.06	7.00e-47	179.00
IUUC-Ocu-073782	Oryctolagus cuniculus	46.90	1.00e-129	455.00
IUUC-Oba-075161	Oryza barthii	75.00	0.00e+00	728.00
IUUC-Obr-076868	Oryza brachyantha	75.22	0.00e+00	729.00
IUUC-Ogl-077062	Oryza glaberrima	75.00	0.00e+00	728.00
IUUC-Ogu-078308	Oryza glumaepatula	75.00	0.00e+00	728.00
IUUC-Oin-079378	Oryza indica	75.00	0.00e+00	728.00
IUUC-Olo-080638	Oryza longistaminata	71.90	0.00e+00	687.00
IUUC-Oni-082368	Oryza nivara	75.00	0.00e+00	728.00
IUUC-Opu-083628	Oryza punctata	75.00	0.00e+00	728.00
IUUC-Oru-085226	Oryza rufipogon	74.78	0.00e+00	727.00
IUUC-Osa-085368	Oryza sativa	75.27	6.00e-130	455.00
IUUC-Ola-086836	Oryzias latipes	47.79	1.00e-132	465.00
IUUC-Olu-087755	Ostreococcus lucimarinus	52.86	2.00e-143	501.00
IUUC-Oga-088170	Otolemur garnettii	46.68	2.00e-129	454.00
IUUC-Oar-089388	Ovis aries	46.90	6.00e-130	456.00
IUUC-Ptr-090494	Pan troglodytes	46.68	4.00e-129	454.00
IUUC-Pan-091697	Papio anubis	46.90	6.00e-130	456.00
IUUC-Psi-093916	Pelodiscus sinensis	46.90	3.00e-124	437.00
IUUC-Pno-095004	Phaeosphaeria nodorum	39.29	2.00e-90	325.00
IUUC-Ppa-095514	Physcomitrella patens	65.49	0.00e+00	662.00
IUUC-Pfo-097432	Poecilia formosa	49.66	7.00e-132	462.00
IUUC-Pab-098423	Pongo abelii	46.90	4.00e-130	457.00
IUUC-Pop-099649	Populus trichocarpa	81.19	0.00e+00	788.00
IUUC-Pca-100365	Procavia capensis	44.69	1.00e-119	422.00
IUUC-Ppe-101379	Prunus persica	77.51	0.00e+00	759.00
IUUC-Pva-102845	Pteropus vampyrus	46.90	2.00e-127	449.00
IUUC-Pgr-103469	Puccinia graminis	35.38	3.00e-63	235.00
IUUC-Ptt-103980	Puccinia triticina	35.14	2.00e-61	229.00
IUUC-Pte-104111	Pyrenophora teres	42.60	7.00e-97	346.00
IUUC-Pyt-104610	Pyrenophora triticirepentis	42.83	1.00e-97	348.00
IUUC-Rno-105082	Rattus norvegicus	46.90	8.00e-131	459.00
IUUC-Sce-106340	Saccharomyces cerevisiae	43.36	3.00e-109	387.00
IUUC-Sha-106584	Sarcophilus harrisii	47.14	2.00e-130	458.00
IUUC-Sja-107703	Schizosaccharomyces japonicus	44.54	3.00e-101	361.00
IUUC-Spo-108046	Schizosaccharomyces pombe	45.43	5.00e-107	380.00
IUUC-Ssl-108574	Sclerotinia sclerotiorum	39.87	9.00e-97	346.00
IUUC-Smo-109548	Selaginella moellendorffii	63.94	0.00e+00	640.00
IUUC-Sit-110242	Setaria italica	73.67	0.00e+00	713.00
IUUC-Stu-112156	Solanum tuberosum	98.23	0.00e+00	908.00
IUUC-Sbi-114739	Sorghum bicolor	73.23	0.00e+00	707.00
IUUC-Sre-114951	Sporisorium reilianum	39.12	2.00e-102	365.00
IUUC-Ssc-115510	Sus scrofa	46.90	9.00e-130	456.00
IUUC-Tgu-117234	Taeniopygia guttata	47.32	6.00e-117	413.00
IUUC-Tru-117986	Takifugu rubripes	46.71	3.00e-127	447.00
IUUC-Tsy-119252	Tarsius syrichta	45.98	3.00e-118	418.00
IUUC-Tni-119785	Tetraodon nigroviridis	48.59	5.00e-126	443.00
IUUC-Tca-121222	Theobroma cacao	80.31	0.00e+00	765.00
IUUC-Tre-122243	Trichoderma reesei	40.53	7.00e-93	333.00
IUUC-Tvi-122293	Trichoderma virens	40.53	1.00e-92	332.00
IUUC-Tae-125191	Triticum aestivum	73.01	0.00e+00	704.00
IUUC-Tur-126098	Triticum urartu	69.68	0.00e+00	643.00
IUUC-Tme-127200	Tuber melanosporum	46.04	1.00e-116	412.00
IUUC-Tbe-127568	Tupaia belangeri	44.54	2.00e-58	219.00
IUUC-Ttr-129185	Tursiops truncatus	42.48	4.00e-109	387.00
IUUC-Uma-129353	Ustilago maydis	39.56	4.00e-102	364.00
IUUC-Vda-129768	Verticillium dahliae	39.17	3.00e-88	318.00
IUUC-Vpa-130572	Vicugna pacos	47.12	2.00e-129	455.00
IUUC-Vvi-131555	Vitis vinifera	82.30	0.00e+00	783.00
IUUC-Xtr-132263	Xenopus tropicalis	47.44	1.00e-107	382.00
IUUC-Xma-133925	Xiphophorus maculatus	49.66	1.00e-131	462.00
IUUC-Yli-134384	Yarrowia lipolytica	45.29	3.00e-111	394.00
IUUC-Zma-135616	Zea mays	73.67	0.00e+00	706.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence