iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tme-127038

Ensembl Protein ID

CAZ84699

UniProt Accession

D5GJK6; D5GJK6_TUBMM

Genbank Protein ID

CAZ84699.1

Protein Name

Eukaryotic translation initiation factor 3 subunit I; Eukaryotic translation initiation factor 3 39 kDa subunit homolog

Genbank Nucleotide ID

FN430332

Gene Name

TIF34; GSTUM_00009054001

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GSTUM_00009054001	CAZ84699	CAZ84699

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-22	77.6	50	88

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH +  + ++  +  tll++Gs D+ti++WD+rtg++lk
   Q: 50   GHVGALWTVDVdPAtTLLATGSADNTIRIWDVRTGKQLK 88
           5777777777774459********************987 PP

Organism

Tuber melanosporum

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MRPILLQGHE RSLTQIKYNK DGDLLFSTAK DHVVCAWYSV NGERVGTYKG HVGALWTVDV 60
DPATTLLATG SADNTIRIWD VRTGKQLKMW EFPTAVKRVE FSEDGTLLLA VTEQRMGHLG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTAAATCA CGAATACACC CCTCACCTTT TTTCCCTATT TAACCCAAAA CTTTTTCTTC 60
TTTGCAGATC TACGAGGATA ATTCGATATG AGACCTATAC TGCTTCAAGG ACATGTGAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR027525--eIF3i
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0010494--C:cytoplasmic stress granule
GO:0022627--C:cytosolic small ribosomal subunit
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0043614--C:multi-eIF complex
GO:0034399--C:nuclear periphery
GO:0003743--F:translation initiation factor activity
GO:0071470--P:cellular response to osmotic stress
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation
GO:0002188--P:translation reinitiation

KEGG

tml:GSTUM_00009054001

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000115	Aegilops tauschii	50.47	1.00e-29	122.00
IUUC-Aml-001321	Ailuropoda melanoleuca	53.50	3.00e-102	362.00
IUUC-Atr-002468	Amborella trichopoda	47.40	2.00e-50	190.00
IUUC-Apl-003841	Anas platyrhynchos	53.21	4.00e-102	362.00
IUUC-Aca-005123	Anolis carolinensis	53.05	4.00e-102	362.00
IUUC-Aly-005473	Arabidopsis lyrata	45.29	2.00e-82	296.00
IUUC-Ath-007094	Arabidopsis thaliana	45.29	6.00e-82	295.00
IUUC-Ago-008000	Ashbya gossypii	54.17	3.00e-107	379.00
IUUC-Acl-008098	Aspergillus clavatus	72.62	3.00e-148	515.00
IUUC-Afl-008494	Aspergillus flavus	73.11	2.00e-149	519.00
IUUC-Afu-009080	Aspergillus fumigatus	71.73	3.00e-147	512.00
IUUC-Ani-009230	Aspergillus nidulans	72.21	5.00e-149	518.00
IUUC-Aor-010114	Aspergillus oryzae	73.11	2.00e-149	519.00
IUUC-Ate-010285	Aspergillus terreus	71.90	2.00e-148	516.00
IUUC-Ame-011534	Astyanax mexicanus	52.11	3.00e-102	362.00
IUUC-Bgr-012121	Blumeria graminis	68.17	2.00e-135	473.00
IUUC-Bta-013143	Bos taurus	53.64	7.00e-103	365.00
IUUC-Bci-013950	Botrytis cinerea	73.64	5.00e-151	525.00
IUUC-Bdi-015019	Brachypodium distachyon	47.08	2.00e-85	306.00
IUUC-Bol-015709	Brassica oleracea	45.32	6.00e-81	293.00
IUUC-Bra-017760	Brassica rapa	45.02	8.00e-81	292.00
IUUC-Cel-018226	Caenorhabditis elegans	40.98	2.00e-76	276.00
IUUC-Cja-019741	Callithrix jacchus	53.64	4.00e-103	365.00
IUUC-Cfa-021204	Canis familiaris	53.50	4.00e-102	362.00
IUUC-Cpo-021661	Cavia porcellus	53.50	2.00e-102	363.00
IUUC-Cre-022952	Chlamydomonas reinhardtii	45.34	9.00e-83	298.00
IUUC-Csa-024038	Chlorocebus sabaeus	53.64	4.00e-103	365.00
IUUC-Cin-025597	Ciona intestinalis	48.80	3.00e-97	346.00
IUUC-Cgl-026583	Colletotrichum gloeosporioides	69.88	4.00e-143	498.00
IUUC-Cne-026838	Cryptococcus neoformans	55.79	8.00e-110	387.00
IUUC-Cme-027304	Cyanidioschyzon merolae	42.55	3.00e-71	259.00
IUUC-Dre-028567	Danio rerio	51.22	1.00e-100	357.00
IUUC-Dno-029171	Dasypus novemcinctus	53.50	1.00e-101	361.00
IUUC-Dor-030257	Dipodomys ordii	43.02	2.00e-37	147.00
IUUC-Dse-031191	Dothistroma septosporum	66.17	5.00e-134	468.00
IUUC-Dme-031879	Drosophila melanogaster	46.18	8.00e-87	311.00
IUUC-Ete-032336	Echinops telfairi	46.79	9.00e-54	201.00
IUUC-Eca-033259	Equus caballus	53.50	3.00e-102	362.00
IUUC-Eeu-035153	Erinaceus europaeus	45.03	3.00e-31	127.00
IUUC-Fca-036489	Felis catus	53.50	3.00e-102	362.00
IUUC-Fal-037485	Ficedula albicollis	53.21	2.00e-102	363.00
IUUC-Fox-037860	Fusarium oxysporum	69.88	4.00e-144	501.00
IUUC-Fso-038188	Fusarium solani	69.88	3.00e-140	489.00
IUUC-Gmo-039311	Gadus morhua	52.29	5.00e-101	358.00
IUUC-Ggr-040045	Gaeumannomyces graminis	72.67	8.00e-151	524.00
IUUC-Gga-040645	Gallus gallus	52.08	1.00e-100	357.00
IUUC-Gac-042086	Gasterosteus aculeatus	51.22	3.00e-99	352.00
IUUC-Gma-043246	Glycine max	45.85	7.00e-83	298.00
IUUC-Ggo-045578	Gorilla gorilla	53.64	4.00e-103	365.00
IUUC-Hsa-046734	Homo sapiens	53.64	4.00e-103	365.00
IUUC-Hvu-047553	Hordeum vulgare	46.63	7.00e-86	308.00
IUUC-Itr-048467	Ictidomys tridecemlineatus	53.19	6.00e-102	361.00
IUUC-Kpa-049325	Komagataella pastoris	55.12	4.00e-112	395.00
IUUC-Lch-049620	Latimeria chalumnae	53.33	9.00e-92	327.00
IUUC-Lpe-051338	Leersia perrieri	45.54	3.00e-78	283.00
IUUC-Loc-052094	Lepisosteus oculatus	46.25	3.00e-86	309.00
IUUC-Lma-053047	Leptosphaeria maculans	71.00	1.00e-144	503.00
IUUC-Laf-053801	Loxodonta africana	52.94	6.00e-99	352.00
IUUC-Mcc-055498	Macaca mulatta	47.58	6.00e-83	298.00
IUUC-Meu-056729	Macropus eugenii	49.55	4.00e-91	325.00
IUUC-Mor-057025	Magnaporthe oryzae	68.37	1.00e-140	490.00
IUUC-Mpo-057511	Magnaporthe poae	72.89	9.00e-149	517.00
IUUC-Mtr-058051	Medicago truncatula	46.63	2.00e-82	297.00
IUUC-Mla-059061	Melampsora laricipopulina	57.01	7.00e-110	388.00
IUUC-Mga-059229	Meleagris gallopavo	52.58	6.00e-100	355.00
IUUC-Mvi-060399	Microbotryum violaceum	58.13	3.00e-109	386.00
IUUC-Mmr-060764	Microcebus murinus	53.64	3.00e-103	366.00
IUUC-Mdo-062088	Monodelphis domestica	53.03	4.00e-100	355.00
IUUC-Mmu-064304	Mus musculus	53.33	7.00e-103	364.00
IUUC-Mac-065520	Musa acuminata	46.54	2.00e-82	296.00
IUUC-Mpu-066340	Mustela putorius furo	53.50	3.00e-102	362.00
IUUC-Mlu-067111	Myotis lucifugus	53.50	2.00e-102	363.00
IUUC-Nfi-068478	Neosartorya fischeri	72.02	4.00e-148	515.00
IUUC-Ncr-068820	Neurospora crassa	69.58	8.00e-145	504.00
IUUC-Nle-069903	Nomascus leucogenys	53.50	1.00e-102	363.00
IUUC-Opr-070221	Ochotona princeps	53.03	4.00e-101	358.00
IUUC-Ont-071765	Oreochromis niloticus	51.22	1.00e-100	357.00
IUUC-Oan-073660	Ornithorhynchus anatinus	50.68	1.00e-86	310.00
IUUC-Ocu-074039	Oryctolagus cuniculus	53.50	2.00e-102	363.00
IUUC-Oba-075395	Oryza barthii	40.37	8.00e-68	248.00
IUUC-Obr-076334	Oryza brachyantha	43.73	2.00e-77	280.00
IUUC-Ogl-077751	Oryza glaberrima	45.87	1.00e-84	303.00
IUUC-Ogu-078207	Oryza glumaepatula	46.01	1.00e-83	301.00
IUUC-Oin-079878	Oryza indica	45.87	5.00e-84	302.00
IUUC-Olo-080677	Oryza longistaminata	39.90	3.00e-76	276.00
IUUC-Ome-081228	Oryza meridionalis	36.10	2.00e-35	140.00
IUUC-Oni-082411	Oryza nivara	40.37	2.00e-67	246.00
IUUC-Opu-083136	Oryza punctata	45.57	4.00e-84	302.00
IUUC-Oru-084916	Oryza rufipogon	44.94	4.00e-82	296.00
IUUC-Osa-085776	Oryza sativa	45.87	1.00e-84	303.00
IUUC-Ola-087053	Oryzias latipes	52.74	3.00e-103	366.00
IUUC-Olu-087602	Ostreococcus lucimarinus	46.60	3.00e-85	306.00
IUUC-Oga-088154	Otolemur garnettii	53.50	2.00e-102	363.00
IUUC-Oar-089915	Ovis aries	53.50	4.00e-102	362.00
IUUC-Ptr-091124	Pan troglodytes	44.27	1.00e-76	277.00
IUUC-Pan-092035	Papio anubis	53.64	4.00e-103	365.00
IUUC-Psi-094096	Pelodiscus sinensis	50.23	3.00e-60	222.00
IUUC-Pno-094988	Phaeosphaeria nodorum	65.86	5.00e-125	438.00
IUUC-Ppa-095536	Physcomitrella patens	47.99	1.00e-85	307.00
IUUC-Pfo-096101	Poecilia formosa	51.83	7.00e-102	361.00
IUUC-Pab-097726	Pongo abelii	53.64	4.00e-103	365.00
IUUC-Pop-099617	Populus trichocarpa	45.26	3.00e-82	296.00
IUUC-Pca-101014	Procavia capensis	53.64	5.00e-103	365.00
IUUC-Ppe-101320	Prunus persica	45.87	5.00e-83	298.00
IUUC-Pva-102789	Pteropus vampyrus	48.17	9.00e-88	314.00
IUUC-Pgr-103479	Puccinia graminis	55.86	5.00e-109	385.00
IUUC-Ptt-103981	Puccinia triticina	55.79	7.00e-107	378.00
IUUC-Pte-104278	Pyrenophora teres	71.60	3.00e-143	498.00
IUUC-Pyt-104492	Pyrenophora triticirepentis	71.60	3.00e-143	498.00
IUUC-Rno-105867	Rattus norvegicus	46.92	3.00e-82	296.00
IUUC-Sce-106251	Saccharomyces cerevisiae	54.30	3.00e-108	382.00
IUUC-Sha-107039	Sarcophilus harrisii	52.69	2.00e-100	357.00
IUUC-Sja-107758	Schizosaccharomyces japonicus	67.07	3.00e-137	479.00
IUUC-Spo-108314	Schizosaccharomyces pombe	67.79	3.00e-137	479.00
IUUC-Ssl-108478	Sclerotinia sclerotiorum	73.94	2.00e-151	526.00
IUUC-Smo-108728	Selaginella moellendorffii	45.99	9.00e-84	301.00
IUUC-Sit-110801	Setaria italica	47.69	2.00e-88	317.00
IUUC-Sly-111326	Solanum lycopersicum	46.32	1.00e-84	304.00
IUUC-Stu-112458	Solanum tuberosum	46.32	2.00e-84	303.00
IUUC-Sbi-114063	Sorghum bicolor	47.37	2.00e-87	313.00
IUUC-Sre-115096	Sporisorium reilianum	58.13	4.00e-106	375.00
IUUC-Ssc-116080	Sus scrofa	53.64	6.00e-103	365.00
IUUC-Tgu-116988	Taeniopygia guttata	53.52	6.00e-103	365.00
IUUC-Tru-118766	Takifugu rubripes	52.13	5.00e-102	362.00
IUUC-Tni-120197	Tetraodon nigroviridis	51.83	5.00e-102	362.00
IUUC-Tca-121316	Theobroma cacao	47.69	2.00e-85	306.00
IUUC-Tre-122097	Trichoderma reesei	70.78	2.00e-144	503.00
IUUC-Tvi-122442	Trichoderma virens	70.48	1.00e-143	500.00
IUUC-Tae-125800	Triticum aestivum	46.32	3.00e-85	306.00
IUUC-Tur-126334	Triticum urartu	39.81	1.00e-66	244.00
IUUC-Ttr-128659	Tursiops truncatus	50.61	3.00e-84	302.00
IUUC-Uma-129464	Ustilago maydis	58.13	7.00e-106	374.00
IUUC-Vda-129841	Verticillium dahliae	71.08	3.00e-146	509.00
IUUC-Vvi-131076	Vitis vinifera	46.30	2.00e-83	300.00
IUUC-Xtr-132395	Xenopus tropicalis	54.43	8.00e-104	367.00
IUUC-Xma-133383	Xiphophorus maculatus	51.83	9.00e-102	361.00
IUUC-Yli-134586	Yarrowia lipolytica	61.56	4.00e-118	415.00
IUUC-Zma-135904	Zea mays	48.30	2.00e-88	317.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence