iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
TRANSFAC	RAID2
Protein 3D Structure
PDB	MMDB
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.00e-06	29.7	469	505
ULD/UDP/UBQ/UBQ_PIM	1.80e-14	54.6	24	95

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 4    edkleqlveMGF.dreealqaLraannnleaAveyLl 39
           ++ le+l++ GF +r+++lqaL a+++++ aA+e+Ll
   Q: 469  QQELEELKALGFaNRDANLQALVATDGDIHAAIEMLL 505
           788*********************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           +++ vkt+++ + e+ + e+++v ++K++i+k   + ++++ LI+ GkiL+D++ Ls+ gi dgs+vh+vv+ 
   Q: 24   IRVSVKTPQDCH-EFFLAENSNVRRFKKQISKYLHCNADRLVLIFTGKILRDQDILSQRGILDGSTVHVVVRS 95
           6899********.*********************************************************986 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MARAREEAGD SQLVSGREPS SRIIRVSVKT PQDCHEFFLA ENSNVRRFKK QISKYLHCNA 60
DRLVLIFTGK ILRDQDILSQ RGILDGSTVH VVVRSHLKGS ACTGTLVGPT GQYTHRSEPS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCAAAGAGA GAAGCAGCTG CCCCCCGCTA TGGGAGCCAG GTGGCTGTAG GGCTACACTG 60
GCAGGGGGGA CCTGCAGGAC GTAGGTGAAA GGACATCACC GAACACCTAC TGGTCCCTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0002--3D-structure
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015940--UBA
IPR009060--UBA-like
IPR015496--Ubiquilin
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin

SMART

SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005739--C:mitochondrion

KEGG

mmu:70980

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001783	Ailuropoda melanoleuca	63.71	1.00e-165	576.00
IUUC-Bta-013009	Bos taurus	62.93	7.00e-163	567.00
IUUC-Cfa-021125	Canis familiaris	60.12	2.00e-144	505.00
IUUC-Cpo-021665	Cavia porcellus	63.25	4.00e-164	571.00
IUUC-Dno-029389	Dasypus novemcinctus	63.25	6.00e-158	550.00
IUUC-Eca-034270	Equus caballus	63.74	7.00e-152	530.00
IUUC-Fca-035593	Felis catus	55.68	1.00e-122	433.00
IUUC-Ggr-039961	Gaeumannomyces graminis	25.12	2.00e-08	53.90
IUUC-Itr-048754	Ictidomys tridecemlineatus	66.98	2.00e-174	605.00
IUUC-Laf-054365	Loxodonta africana	61.08	1.00e-151	529.00
IUUC-Mdo-062710	Monodelphis domestica	45.91	3.00e-83	302.00
IUUC-Ocu-073826	Oryctolagus cuniculus	61.97	1.00e-135	476.00
IUUC-Rno-105951	Rattus norvegicus	88.43	0.00e+00	815.00
IUUC-Sha-106708	Sarcophilus harrisii	43.01	6.00e-79	288.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence