iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113947

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G192400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g026520	Sb06g026520.1	Sb06g026520.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.80e-22	78.6	465	536

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceen 72
           vp +flCp++ +++++Pv++++G+t++r +I +wl++g + cPvt+q l++ ++   n +l+rli++w +e+
   Q: 465  VPNDFLCPLTRQIFNNPVTIETGQTFERHAIVQWLDRGFRMCPVTGQDLSSLTVpDTNRVLKRLIDNWKSEH 536
           89***********************************************99999899***********9987 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAPPPPSLLR ELLAADGFKN RRRPPDSSAP AASRAASMPL QHRRPGKPPS RSQSDVLTRS 60
RLRQMNVDAD DGSRDAGAER RRAATATRGS SASLTSARGH SNKGDAGARR GSESDPSAVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACCGAGGAT GCTGCTGCTG CACCACTGCC ACCGCGGGGC GTAGCAGAGC CAGCTCCTTT 60
GTCGACTCGG TCAAGTCACC CGCTACATCC ACGCCAATGG CGCCGCCCCC GCCGTCCTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sbi:SORBI_06g026493

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003133	Amborella trichopoda	33.47	4.00e-69	256.00
IUUC-Afl-008510	Aspergillus flavus	25.62	2.50e-01	30.80
IUUC-Aor-010172	Aspergillus oryzae	25.62	2.60e-01	30.80
IUUC-Bdi-014999	Brachypodium distachyon	60.24	0.00e+00	891.00
IUUC-Ggr-040059	Gaeumannomyces graminis	35.53	1.00e-03	36.60
IUUC-Gma-044073	Glycine max	29.38	1.00e-90	327.00
IUUC-Hvu-047722	Hordeum vulgare	54.25	3.00e-152	531.00
IUUC-Lpe-051567	Leersia perrieri	56.01	0.00e+00	639.00
IUUC-Mtr-058670	Medicago truncatula	30.25	3.00e-69	256.00
IUUC-Mac-065130	Musa acuminata	29.52	1.00e-76	280.00
IUUC-Oba-075449	Oryza barthii	61.65	0.00e+00	943.00
IUUC-Obr-076588	Oryza brachyantha	60.24	0.00e+00	693.00
IUUC-Ogu-078984	Oryza glumaepatula	60.77	0.00e+00	922.00
IUUC-Olo-080563	Oryza longistaminata	63.51	0.00e+00	794.00
IUUC-Ome-081747	Oryza meridionalis	61.15	0.00e+00	980.00
IUUC-Oni-082227	Oryza nivara	60.90	0.00e+00	929.00
IUUC-Opu-083803	Oryza punctata	60.73	0.00e+00	733.00
IUUC-Oru-084717	Oryza rufipogon	61.33	0.00e+00	938.00
IUUC-Osa-085390	Oryza sativa	61.88	0.00e+00	730.00
IUUC-Pop-099189	Populus trichocarpa	34.77	5.00e-70	258.00
IUUC-Ppe-101493	Prunus persica	34.43	8.00e-65	241.00
IUUC-Ssl-108555	Sclerotinia sclerotiorum	30.51	2.10e-02	32.70
IUUC-Sit-110010	Setaria italica	69.58	0.00e+00	976.00
IUUC-Stu-112239	Solanum tuberosum	33.61	5.00e-67	248.00
IUUC-Tca-121435	Theobroma cacao	35.11	4.00e-77	282.00
IUUC-Tae-125513	Triticum aestivum	53.95	0.00e+00	800.00
IUUC-Tur-126526	Triticum urartu	60.54	6.00e-64	238.00
IUUC-Vvi-130964	Vitis vinifera	42.86	1.00e-41	164.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence