iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-113994

Ensembl Protein ID

Sb08g004850.1

UniProt Accession

C5YST4; C5YST4_SORBI

Genbank Protein ID

EES16751.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G057600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g004850	Sb08g004850.1	Sb08g004850.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-29	100.3	447	485

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+d+v +l +  sd  l+s+s D+t+++WD+ +  +lk
   Q: 447  GHQDDVLDLTWskSDQQLLSSSMDKTVRLWDTESKACLK 485
           8***********99999**************99988887 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MWMSDEPMSI QERRRRLHQG LGMASSRDLA LRRHSMKKRP ADVPRAMSRS VSRPKPPPSP 60
IPVTGTASAA AANVPSTTSA ASQAVAAAAT RPAKEAITRR RSDSNLVVVR DGASVSGSQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGGATGT CCGACGAGCC CATGTCCATC CAGGAGCGCC GCCGCCGCCT CCACCAGGGC 60
CTCGGGATGG CCAGCAGCCG GGACCTCGCG CTGCGCCGGC ACAGCATGAA GAAACGCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005886--C:plasma membrane
GO:0015171--F:amino acid transmembrane transporter activity
GO:0003333--P:amino acid transmembrane transport

KEGG

sbi:SORBI_08g004810

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001089	Aegilops tauschii	61.76	0.00e+00	640.00
IUUC-Aml-001198	Ailuropoda melanoleuca	40.06	8.00e-61	228.00
IUUC-Aca-005216	Anolis carolinensis	39.75	3.00e-60	226.00
IUUC-Acl-008290	Aspergillus clavatus	33.75	1.00e-43	171.00
IUUC-Afl-008536	Aspergillus flavus	40.43	7.00e-57	214.00
IUUC-Ani-009270	Aspergillus nidulans	39.06	4.00e-55	209.00
IUUC-Ang-009627	Aspergillus niger	47.98	1.00e-52	201.00
IUUC-Aor-010153	Aspergillus oryzae	40.43	5.00e-57	215.00
IUUC-Ate-010263	Aspergillus terreus	41.10	2.00e-58	220.00
IUUC-Ame-011096	Astyanax mexicanus	38.70	3.00e-58	219.00
IUUC-Bdi-014090	Brachypodium distachyon	73.21	8.00e-110	390.00
IUUC-Cja-019169	Callithrix jacchus	40.68	1.00e-61	230.00
IUUC-Cpo-021357	Cavia porcellus	40.37	8.00e-61	228.00
IUUC-Csa-023121	Chlorocebus sabaeus	40.37	1.00e-60	227.00
IUUC-Eeu-035325	Erinaceus europaeus	35.42	4.00e-46	179.00
IUUC-Fox-037744	Fusarium oxysporum	44.20	3.00e-37	148.00
IUUC-Gmo-039226	Gadus morhua	39.32	2.00e-58	220.00
IUUC-Ggr-039923	Gaeumannomyces graminis	35.45	4.00e-56	213.00
IUUC-Hvu-047791	Hordeum vulgare	60.58	0.00e+00	808.00
IUUC-Lpe-051279	Leersia perrieri	70.23	2.00e-133	469.00
IUUC-Loc-052691	Lepisosteus oculatus	37.27	7.00e-59	221.00
IUUC-Laf-054066	Loxodonta africana	40.06	1.00e-60	227.00
IUUC-Mcc-055055	Macaca mulatta	40.37	1.00e-60	227.00
IUUC-Mpo-057592	Magnaporthe poae	36.14	7.00e-55	208.00
IUUC-Mla-059075	Melampsora laricipopulina	34.22	2.00e-29	122.00
IUUC-Mac-064810	Musa acuminata	50.51	3.00e-149	521.00
IUUC-Oba-075025	Oryza barthii	66.47	2.00e-161	563.00
IUUC-Obr-076193	Oryza brachyantha	46.96	4.00e-134	471.00
IUUC-Ogl-077530	Oryza glaberrima	67.04	0.00e+00	681.00
IUUC-Oin-080074	Oryza indica	66.14	0.00e+00	680.00
IUUC-Olo-080681	Oryza longistaminata	64.48	7.00e-148	517.00
IUUC-Ome-081097	Oryza meridionalis	64.35	0.00e+00	657.00
IUUC-Oni-082091	Oryza nivara	65.03	0.00e+00	668.00
IUUC-Opu-083851	Oryza punctata	64.82	0.00e+00	662.00
IUUC-Oru-084429	Oryza rufipogon	64.87	0.00e+00	667.00
IUUC-Osa-085616	Oryza sativa	66.14	0.00e+00	679.00
IUUC-Ola-086963	Oryzias latipes	37.50	8.00e-51	194.00
IUUC-Olu-087651	Ostreococcus lucimarinus	44.75	6.00e-51	193.00
IUUC-Oga-088623	Otolemur garnettii	40.37	1.00e-60	227.00
IUUC-Oar-090357	Ovis aries	40.06	9.00e-61	227.00
IUUC-Pan-092290	Papio anubis	40.37	1.00e-60	227.00
IUUC-Pab-098364	Pongo abelii	40.37	1.00e-60	227.00
IUUC-Pca-100159	Procavia capensis	32.92	8.00e-42	164.00
IUUC-Sit-110115	Setaria italica	74.53	0.00e+00	978.00
IUUC-Tru-117808	Takifugu rubripes	37.46	4.00e-58	219.00
IUUC-Tsy-118845	Tarsius syrichta	42.20	6.00e-29	122.00
IUUC-Tre-122175	Trichoderma reesei	37.73	2.00e-55	209.00
IUUC-Tae-122995	Triticum aestivum	66.56	0.00e+00	704.00
IUUC-Tur-126419	Triticum urartu	65.02	0.00e+00	660.00
IUUC-Yli-134376	Yarrowia lipolytica	32.98	5.00e-52	198.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence