iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017042

Ensembl Protein ID

Bra039034.1-P

UniProt Accession

M4FD64; M4FD64_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra039034	Bra039034.1	Bra039034.1-P

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/APC_C/APC_C	34.97	1.00e-47	186.00	IUUC-Sce-106187

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

MEAMLVDCVR NSLSHFVYKN AIFMCERLCA EFPSEVNLQL LATSYLQNNQ AYSAYHLLKG 60
THMAQSRYLF ALSCYQMDLL NEAESALSPL NEPGAEIPNG AAGHYLLGLI YKYTDRRKNA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGCTA TGCTAGTGGA CTGTGTACGC AACAGCCTCA GTCATTTTGT GTACAAGAAT 60
GCCATTTTCA TGTGCGAGCG TCTCTGCGCT GAGTTTCCCT CTGAGGTTAT TACCTCTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0802--TPR repeat

Interpro

IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR001440--TPR_1
IPR019734--TPR_repeat

PROSITE

PS50005--TPR
PS50293--TPR_REGION

Pfam

PF00515--TPR_1
PF13181--TPR_8

SMART

SM00028--TPR

Gene Ontology

GO:0009504--C:cell plate
GO:0005634--C:nucleus
GO:0005819--C:spindle
GO:0030154--P:cell differentiation
GO:0007346--P:regulation of mitotic cell cycle
GO:0009733--P:response to auxin
GO:0048829--P:root cap development
GO:0010071--P:root meristem specification

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000478	Aegilops tauschii	50.40	0.00e+00	656.00
IUUC-Aml-002123	Ailuropoda melanoleuca	46.39	4.00e-95	342.00
IUUC-Atr-002921	Amborella trichopoda	58.44	0.00e+00	838.00
IUUC-Apl-003652	Anas platyrhynchos	46.39	2.00e-94	340.00
IUUC-Aca-004797	Anolis carolinensis	46.08	8.00e-93	334.00
IUUC-Aly-006146	Arabidopsis lyrata	47.00	2.00e-173	602.00
IUUC-Ath-007523	Arabidopsis thaliana	92.01	0.00e+00	1402.00
IUUC-Ago-007939	Ashbya gossypii	34.46	1.00e-49	191.00
IUUC-Acl-008169	Aspergillus clavatus	40.50	1.00e-75	277.00
IUUC-Afl-008631	Aspergillus flavus	40.17	4.00e-68	252.00
IUUC-Afu-008990	Aspergillus fumigatus	42.99	2.00e-74	273.00
IUUC-Ani-009208	Aspergillus nidulans	45.29	2.00e-42	167.00
IUUC-Ang-009561	Aspergillus niger	41.10	6.00e-76	278.00
IUUC-Aor-009958	Aspergillus oryzae	39.94	1.00e-67	251.00
IUUC-Ate-010597	Aspergillus terreus	43.90	1.00e-75	277.00
IUUC-Ame-010734	Astyanax mexicanus	47.44	7.00e-70	257.00
IUUC-Bgr-012282	Blumeria graminis	39.62	6.00e-65	242.00
IUUC-Bta-013499	Bos taurus	46.39	4.00e-95	342.00
IUUC-Bci-013946	Botrytis cinerea	29.04	7.00e-80	291.00
IUUC-Bdi-014213	Brachypodium distachyon	55.04	0.00e+00	768.00
IUUC-Bol-016307	Brassica oleracea	98.52	0.00e+00	1455.00
IUUC-Cel-018481	Caenorhabditis elegans	31.65	7.00e-43	168.00
IUUC-Cja-019393	Callithrix jacchus	46.39	2.00e-95	343.00
IUUC-Cfa-020221	Canis familiaris	46.39	4.00e-95	342.00
IUUC-Cpo-021792	Cavia porcellus	46.08	6.00e-95	342.00
IUUC-Csa-023091	Chlorocebus sabaeus	46.39	4.00e-95	342.00
IUUC-Cin-025231	Ciona intestinalis	41.69	1.00e-71	264.00
IUUC-Csv-025983	Ciona savignyi	30.21	1.00e-92	333.00
IUUC-Cgl-026436	Colletotrichum gloeosporioides	40.37	1.00e-63	238.00
IUUC-Cne-026779	Cryptococcus neoformans	38.28	2.00e-58	220.00
IUUC-Cme-027126	Cyanidioschyzon merolae	34.80	2.00e-52	199.00
IUUC-Dre-028038	Danio rerio	46.69	4.00e-95	342.00
IUUC-Dno-029681	Dasypus novemcinctus	46.39	4.00e-95	342.00
IUUC-Dor-030742	Dipodomys ordii	37.32	4.00e-50	192.00
IUUC-Dse-031468	Dothistroma septosporum	29.02	7.00e-58	218.00
IUUC-Dme-031900	Drosophila melanogaster	40.80	2.00e-64	240.00
IUUC-Ete-032396	Echinops telfairi	42.17	5.00e-84	305.00
IUUC-Eca-034414	Equus caballus	46.39	4.00e-95	342.00
IUUC-Eeu-034864	Erinaceus europaeus	40.66	2.00e-77	283.00
IUUC-Fca-036459	Felis catus	46.39	2.00e-94	340.00
IUUC-Fox-037700	Fusarium oxysporum	41.61	3.00e-65	241.00
IUUC-Fso-038112	Fusarium solani	39.88	9.00e-73	268.00
IUUC-Gmo-038876	Gadus morhua	39.73	2.00e-90	326.00
IUUC-Ggr-039822	Gaeumannomyces graminis	39.01	1.00e-66	248.00
IUUC-Gga-040585	Gallus gallus	39.82	3.00e-95	342.00
IUUC-Gac-042126	Gasterosteus aculeatus	32.99	7.00e-115	407.00
IUUC-Gma-044263	Glycine max	72.76	0.00e+00	1090.00
IUUC-Ggo-045272	Gorilla gorilla	39.46	5.00e-76	278.00
IUUC-Hsa-045682	Homo sapiens	39.86	2.00e-95	343.00
IUUC-Hvu-047421	Hordeum vulgare	71.26	3.00e-103	367.00
IUUC-Itr-048133	Ictidomys tridecemlineatus	46.39	4.00e-95	341.00
IUUC-Kpa-049367	Komagataella pastoris	28.14	7.00e-72	265.00
IUUC-Lch-049755	Latimeria chalumnae	41.19	2.00e-96	346.00
IUUC-Lpe-051689	Leersia perrieri	53.56	0.00e+00	773.00
IUUC-Loc-052907	Lepisosteus oculatus	46.60	9.00e-94	337.00
IUUC-Lma-053272	Leptosphaeria maculans	41.18	1.00e-67	251.00
IUUC-Laf-054312	Loxodonta africana	46.08	9.00e-95	341.00
IUUC-Mcc-055312	Macaca mulatta	46.39	4.00e-95	342.00
IUUC-Meu-056290	Macropus eugenii	35.00	2.00e-74	273.00
IUUC-Mor-057118	Magnaporthe oryzae	38.70	3.00e-66	246.00
IUUC-Mpo-057620	Magnaporthe poae	39.01	9.00e-67	248.00
IUUC-Mtr-058302	Medicago truncatula	67.59	0.00e+00	1042.00
IUUC-Mla-058835	Melampsora laricipopulina	31.15	3.00e-43	168.00
IUUC-Mga-060010	Meleagris gallopavo	46.39	1.00e-94	340.00
IUUC-Mvi-060340	Microbotryum violaceum	34.00	5.00e-60	226.00
IUUC-Mmr-060610	Microcebus murinus	46.39	1.00e-89	323.00
IUUC-Mdo-062216	Monodelphis domestica	40.00	7.00e-95	341.00
IUUC-Mmu-063476	Mus musculus	39.77	3.00e-94	339.00
IUUC-Mac-065409	Musa acuminata	59.58	0.00e+00	868.00
IUUC-Mpu-066213	Mustela putorius furo	46.39	4.00e-95	342.00
IUUC-Mlu-067540	Myotis lucifugus	46.39	4.00e-95	342.00
IUUC-Nfi-068437	Neosartorya fischeri	43.29	2.00e-75	276.00
IUUC-Ncr-068882	Neurospora crassa	39.94	1.00e-69	258.00
IUUC-Nle-068976	Nomascus leucogenys	46.39	5.00e-95	342.00
IUUC-Opr-071171	Ochotona princeps	42.17	9.00e-83	301.00
IUUC-Ont-071295	Oreochromis niloticus	41.24	2.00e-93	337.00
IUUC-Oan-072896	Ornithorhynchus anatinus	48.42	5.00e-87	313.00
IUUC-Ocu-074828	Oryctolagus cuniculus	46.39	3.00e-95	343.00
IUUC-Oba-075176	Oryza barthii	50.80	0.00e+00	728.00
IUUC-Obr-076622	Oryza brachyantha	55.76	0.00e+00	797.00
IUUC-Ogu-078158	Oryza glumaepatula	54.50	0.00e+00	790.00
IUUC-Oin-079840	Oryza indica	55.95	0.00e+00	822.00
IUUC-Olo-080632	Oryza longistaminata	69.48	1.00e-132	466.00
IUUC-Ome-081193	Oryza meridionalis	56.08	0.00e+00	823.00
IUUC-Oni-082335	Oryza nivara	53.21	0.00e+00	768.00
IUUC-Opu-083857	Oryza punctata	69.79	1.00e-123	436.00
IUUC-Oru-085165	Oryza rufipogon	53.21	0.00e+00	767.00
IUUC-Osa-085529	Oryza sativa	65.85	2.00e-144	504.00
IUUC-Olu-087803	Ostreococcus lucimarinus	54.29	5.00e-94	337.00
IUUC-Oga-088851	Otolemur garnettii	46.39	5.00e-95	342.00
IUUC-Oar-089794	Ovis aries	39.86	2.00e-95	343.00
IUUC-Ptr-091588	Pan troglodytes	46.39	4.00e-95	342.00
IUUC-Pan-092083	Papio anubis	33.98	2.00e-115	409.00
IUUC-Psi-093368	Pelodiscus sinensis	46.39	2.00e-94	340.00
IUUC-Pma-094306	Petromyzon marinus	46.97	7.00e-94	338.00
IUUC-Pno-094898	Phaeosphaeria nodorum	30.65	1.00e-74	273.00
IUUC-Ppa-095288	Physcomitrella patens	45.42	8.00e-173	600.00
IUUC-Pfo-097263	Poecilia formosa	44.99	5.00e-94	338.00
IUUC-Pab-097782	Pongo abelii	46.39	3.00e-95	342.00
IUUC-Pca-100771	Procavia capensis	39.04	1.00e-69	257.00
IUUC-Ppe-102042	Prunus persica	70.11	0.00e+00	1034.00
IUUC-Pva-103207	Pteropus vampyrus	46.39	4.00e-95	342.00
IUUC-Pgr-103352	Puccinia graminis	34.56	3.00e-48	187.00
IUUC-Ptt-103992	Puccinia triticina	39.62	3.00e-29	124.00
IUUC-Pte-104138	Pyrenophora teres	39.69	1.00e-67	251.00
IUUC-Pyt-104652	Pyrenophora triticirepentis	27.44	6.00e-75	275.00
IUUC-Rno-105451	Rattus norvegicus	39.41	2.00e-94	340.00
IUUC-Sce-106187	Saccharomyces cerevisiae	31.77	5.00e-48	185.00
IUUC-Sha-107398	Sarcophilus harrisii	40.00	9.00e-95	341.00
IUUC-Sja-107984	Schizosaccharomyces japonicus	40.06	4.00e-68	252.00
IUUC-Spo-108274	Schizosaccharomyces pombe	40.37	2.00e-75	276.00
IUUC-Smo-109678	Selaginella moellendorffii	50.95	2.00e-137	482.00
IUUC-Sit-110813	Setaria italica	55.01	0.00e+00	768.00
IUUC-Sly-111637	Solanum lycopersicum	69.61	0.00e+00	823.00
IUUC-Stu-112086	Solanum tuberosum	69.39	0.00e+00	1024.00
IUUC-Sar-113214	Sorex araneus	46.69	3.00e-95	342.00
IUUC-Sre-114904	Sporisorium reilianum	33.20	2.00e-28	121.00
IUUC-Ssc-115692	Sus scrofa	49.07	1.00e-68	253.00
IUUC-Tgu-116466	Taeniopygia guttata	39.86	8.00e-95	341.00
IUUC-Tru-118417	Takifugu rubripes	38.64	2.00e-92	333.00
IUUC-Tsy-118796	Tarsius syrichta	46.39	5.00e-95	342.00
IUUC-Tni-120331	Tetraodon nigroviridis	44.97	2.00e-91	328.00
IUUC-Tca-121321	Theobroma cacao	54.59	0.00e+00	751.00
IUUC-Tre-122083	Trichoderma reesei	38.64	4.00e-68	252.00
IUUC-Tvi-122558	Trichoderma virens	38.94	1.00e-69	258.00
IUUC-Tae-125209	Triticum aestivum	56.37	0.00e+00	805.00
IUUC-Tur-126187	Triticum urartu	47.78	7.00e-167	580.00
IUUC-Tme-127012	Tuber melanosporum	29.12	1.00e-76	280.00
IUUC-Tbe-127774	Tupaia belangeri	39.76	3.00e-75	276.00
IUUC-Ttr-128605	Tursiops truncatus	42.17	2.00e-84	306.00
IUUC-Uma-129576	Ustilago maydis	34.01	2.00e-27	117.00
IUUC-Vda-129996	Verticillium dahliae	37.35	1.00e-49	189.00
IUUC-Vpa-130122	Vicugna pacos	40.23	3.00e-95	342.00
IUUC-Vvi-131580	Vitis vinifera	71.26	0.00e+00	1075.00
IUUC-Xtr-131756	Xenopus tropicalis	46.48	2.00e-88	320.00
IUUC-Xma-133214	Xiphophorus maculatus	45.97	8.00e-93	334.00
IUUC-Yli-134473	Yarrowia lipolytica	37.20	9.00e-64	237.00
IUUC-Zma-135179	Zea mays	54.86	0.00e+00	785.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence