iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Uma-129578

Ensembl Protein ID

KIS71740

UniProt Accession

Q4PI88; A0A0D1EBM2; EIF3F_USTMA

Genbank Protein ID

KIS71740.1

Protein Name

Eukaryotic translation initiation factor 3 subunit F

Genbank Nucleotide ID

CM003140

Gene Name

UMAG_00175

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
UMAG_00175	KIS71740	KIS71740

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	39.42	1.00e-49	194.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Ustilago maydis

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MSLAGSSSSA LHLDFPASTG SGVMHSRSVT GVHVHPVALF SILDHYLRRN DGQHRVIGTL 60
LGTRTESEIE IKNCFAVPHL EDAEEGQVQV DMEYHRSMYE LCQKVRPDEV IVGWYATSPE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGCTCG CCGGATCATC ATCTTCGGCT CTTCACCTCG ACTTCCCAGC CTCGACGGGA 60
TCGGGTGTGA TGCACTCTCG CTCTGTCACT GGCGTCCACG TTCACCCTGT CGCCCTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0005829--C:cytosol
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0005634--C:nucleus
GO:0003743--F:translation initiation factor activity
GO:0002183--P:cytoplasmic translational initiation

KEGG

uma:UMAG_00175

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	32.08	5.00e-32	129.00
IUUC-Aml-001527	Ailuropoda melanoleuca	39.42	1.00e-51	195.00
IUUC-Atr-002686	Amborella trichopoda	37.61	3.00e-35	140.00
IUUC-Apl-003977	Anas platyrhynchos	37.55	4.00e-41	159.00
IUUC-Aca-004335	Anolis carolinensis	39.71	4.00e-54	203.00
IUUC-Aly-005945	Arabidopsis lyrata	33.63	1.00e-36	144.00
IUUC-Ath-007045	Arabidopsis thaliana	33.19	7.00e-35	139.00
IUUC-Acl-008365	Aspergillus clavatus	45.68	4.00e-61	226.00
IUUC-Afl-008742	Aspergillus flavus	46.04	3.00e-60	223.00
IUUC-Afu-009030	Aspergillus fumigatus	45.68	4.00e-61	226.00
IUUC-Ani-009212	Aspergillus nidulans	46.04	3.00e-61	226.00
IUUC-Ang-009712	Aspergillus niger	45.68	1.00e-60	224.00
IUUC-Aor-009885	Aspergillus oryzae	46.76	5.00e-62	229.00
IUUC-Ate-010315	Aspergillus terreus	45.68	3.00e-59	220.00
IUUC-Ame-010801	Astyanax mexicanus	35.64	9.00e-32	128.00
IUUC-Bgr-011982	Blumeria graminis	44.67	1.00e-58	218.00
IUUC-Bta-012804	Bos taurus	39.05	6.00e-51	192.00
IUUC-Bci-013891	Botrytis cinerea	41.50	1.00e-52	198.00
IUUC-Bdi-014328	Brachypodium distachyon	35.53	6.00e-36	142.00
IUUC-Bol-015446	Brassica oleracea	33.20	4.00e-36	143.00
IUUC-Bra-016862	Brassica rapa	33.33	2.00e-36	144.00
IUUC-Cel-018171	Caenorhabditis elegans	31.49	4.00e-33	133.00
IUUC-Cja-019335	Callithrix jacchus	39.42	1.00e-51	195.00
IUUC-Cfa-020138	Canis familiaris	39.05	3.00e-51	193.00
IUUC-Cpo-022109	Cavia porcellus	36.33	5.00e-41	159.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	39.72	5.00e-50	189.00
IUUC-Csa-023994	Chlorocebus sabaeus	39.42	1.00e-51	195.00
IUUC-Cho-024351	Choloepus hoffmanni	30.63	2.00e-27	114.00
IUUC-Cin-025801	Ciona intestinalis	38.46	2.00e-49	187.00
IUUC-Csv-025805	Ciona savignyi	37.87	2.00e-47	180.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	38.08	3.00e-53	200.00
IUUC-Cne-026868	Cryptococcus neoformans	39.27	4.00e-45	173.00
IUUC-Cme-027328	Cyanidioschyzon merolae	27.94	7.00e-15	72.80
IUUC-Dre-028085	Danio rerio	42.70	5.00e-56	209.00
IUUC-Dno-030099	Dasypus novemcinctus	39.42	2.00e-51	194.00
IUUC-Dor-030324	Dipodomys ordii	35.42	5.00e-41	159.00
IUUC-Dse-031314	Dothistroma septosporum	47.62	1.00e-66	244.00
IUUC-Dme-031926	Drosophila melanogaster	35.97	4.00e-48	182.00
IUUC-Ete-032569	Echinops telfairi	39.93	1.00e-49	187.00
IUUC-Eca-033502	Equus caballus	38.75	5.00e-49	186.00
IUUC-Eeu-034883	Erinaceus europaeus	29.26	1.00e-16	77.80
IUUC-Fca-035873	Felis catus	39.42	1.00e-51	195.00
IUUC-Fal-036921	Ficedula albicollis	40.22	7.00e-55	205.00
IUUC-Fox-037765	Fusarium oxysporum	40.20	2.00e-48	184.00
IUUC-Fso-038240	Fusarium solani	39.93	2.00e-48	184.00
IUUC-Gmo-038864	Gadus morhua	41.09	1.00e-56	211.00
IUUC-Ggr-039862	Gaeumannomyces graminis	38.83	2.00e-47	181.00
IUUC-Gga-040952	Gallus gallus	40.22	8.00e-55	205.00
IUUC-Gac-041677	Gasterosteus aculeatus	41.07	4.00e-55	206.00
IUUC-Gma-043061	Glycine max	36.56	2.00e-32	131.00
IUUC-Ggo-045591	Gorilla gorilla	39.42	1.00e-51	195.00
IUUC-Hsa-046860	Homo sapiens	39.42	1.00e-51	195.00
IUUC-Hvu-047410	Hordeum vulgare	28.78	1.00e-13	67.00
IUUC-Itr-048211	Ictidomys tridecemlineatus	39.78	3.00e-52	196.00
IUUC-Lch-049410	Latimeria chalumnae	49.64	2.00e-34	137.00
IUUC-Lpe-051102	Leersia perrieri	35.38	6.00e-35	139.00
IUUC-Loc-052016	Lepisosteus oculatus	35.64	8.00e-42	162.00
IUUC-Lma-053157	Leptosphaeria maculans	47.08	2.00e-64	237.00
IUUC-Laf-054568	Loxodonta africana	39.42	1.00e-51	195.00
IUUC-Mcc-054613	Macaca mulatta	39.42	1.00e-51	195.00
IUUC-Meu-056832	Macropus eugenii	25.46	2.00e-14	70.50
IUUC-Mor-057104	Magnaporthe oryzae	40.45	1.00e-52	198.00
IUUC-Mtr-058445	Medicago truncatula	34.59	1.00e-40	157.00
IUUC-Mla-059038	Melampsora laricipopulina	40.07	5.00e-52	196.00
IUUC-Mga-059548	Meleagris gallopavo	37.34	1.00e-43	167.00
IUUC-Mvi-060520	Microbotryum violaceum	37.95	7.00e-45	172.00
IUUC-Mdo-062376	Monodelphis domestica	39.42	6.00e-52	196.00
IUUC-Mmu-063254	Mus musculus	39.78	5.00e-51	193.00
IUUC-Mac-065635	Musa acuminata	36.97	6.00e-40	155.00
IUUC-Mpu-066314	Mustela putorius furo	39.42	1.00e-51	195.00
IUUC-Mlu-067512	Myotis lucifugus	40.15	1.00e-52	198.00
IUUC-Nfi-068262	Neosartorya fischeri	45.68	4.00e-61	226.00
IUUC-Ncr-068872	Neurospora crassa	40.74	8.00e-54	202.00
IUUC-Nle-070118	Nomascus leucogenys	39.42	1.00e-51	195.00
IUUC-Opr-071228	Ochotona princeps	36.29	8.00e-40	154.00
IUUC-Ont-072600	Oreochromis niloticus	40.15	8.00e-55	205.00
IUUC-Oan-073584	Ornithorhynchus anatinus	37.34	4.00e-42	162.00
IUUC-Ocu-074542	Oryctolagus cuniculus	39.42	7.00e-52	196.00
IUUC-Oba-075923	Oryza barthii	35.04	5.00e-36	142.00
IUUC-Obr-076313	Oryza brachyantha	36.15	1.00e-36	144.00
IUUC-Ogl-076932	Oryza glaberrima	35.04	5.00e-36	142.00
IUUC-Ogu-078152	Oryza glumaepatula	35.04	5.00e-36	142.00
IUUC-Oin-079528	Oryza indica	35.04	5.00e-36	142.00
IUUC-Olo-080401	Oryza longistaminata	35.04	5.00e-36	142.00
IUUC-Ome-081553	Oryza meridionalis	35.40	2.00e-36	144.00
IUUC-Oni-082090	Oryza nivara	34.67	2.00e-35	140.00
IUUC-Opu-083583	Oryza punctata	35.38	7.00e-35	139.00
IUUC-Oru-084492	Oryza rufipogon	35.04	5.00e-36	142.00
IUUC-Osa-085383	Oryza sativa	35.04	5.00e-36	142.00
IUUC-Ola-086835	Oryzias latipes	40.00	4.00e-54	202.00
IUUC-Olu-087716	Ostreococcus lucimarinus	26.89	5.00e-24	102.00
IUUC-Oga-088886	Otolemur garnettii	39.42	2.00e-51	194.00
IUUC-Oar-090079	Ovis aries	39.05	4.00e-51	192.00
IUUC-Ptr-091457	Pan troglodytes	39.42	1.00e-51	195.00
IUUC-Pan-092317	Papio anubis	31.91	2.00e-22	97.40
IUUC-Psi-093129	Pelodiscus sinensis	36.15	1.00e-43	168.00
IUUC-Pma-094488	Petromyzon marinus	39.93	1.00e-56	211.00
IUUC-Pno-095049	Phaeosphaeria nodorum	46.74	1.00e-64	238.00
IUUC-Ppa-095341	Physcomitrella patens	39.44	1.00e-50	191.00
IUUC-Pfo-096286	Poecilia formosa	39.25	7.00e-55	205.00
IUUC-Pab-097765	Pongo abelii	39.42	1.00e-51	195.00
IUUC-Pop-099131	Populus trichocarpa	35.53	5.00e-39	152.00
IUUC-Pca-100524	Procavia capensis	28.99	6.00e-22	95.90
IUUC-Ppe-101934	Prunus persica	37.74	1.00e-41	161.00
IUUC-Pva-102577	Pteropus vampyrus	40.15	2.00e-52	197.00
IUUC-Pgr-103521	Puccinia graminis	42.41	3.00e-56	210.00
IUUC-Pte-104304	Pyrenophora teres	46.88	5.00e-65	239.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	47.22	1.00e-65	241.00
IUUC-Rno-105717	Rattus norvegicus	39.42	2.00e-51	194.00
IUUC-Sha-107190	Sarcophilus harrisii	38.66	5.00e-50	189.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	44.60	1.00e-60	224.00
IUUC-Spo-108355	Schizosaccharomyces pombe	44.12	7.00e-64	235.00
IUUC-Smo-109374	Selaginella moellendorffii	43.07	2.00e-54	203.00
IUUC-Sit-110119	Setaria italica	35.71	4.00e-37	146.00
IUUC-Sly-111570	Solanum lycopersicum	34.75	2.00e-32	131.00
IUUC-Stu-112308	Solanum tuberosum	37.72	7.00e-39	152.00
IUUC-Sar-113515	Sorex araneus	31.76	3.00e-07	46.60
IUUC-Sbi-114605	Sorghum bicolor	35.34	7.00e-37	146.00
IUUC-Sre-114906	Sporisorium reilianum	96.21	1.00e-167	580.00
IUUC-Tgu-117087	Taeniopygia guttata	37.34	2.00e-43	167.00
IUUC-Tru-117700	Takifugu rubripes	40.88	8.00e-56	208.00
IUUC-Tni-120470	Tetraodon nigroviridis	41.97	7.00e-56	208.00
IUUC-Tca-121109	Theobroma cacao	38.05	4.00e-34	136.00
IUUC-Tre-122095	Trichoderma reesei	40.26	1.00e-49	188.00
IUUC-Tvi-122580	Trichoderma virens	40.26	4.00e-50	189.00
IUUC-Tae-125129	Triticum aestivum	35.34	3.00e-36	143.00
IUUC-Tur-126658	Triticum urartu	30.74	1.00e-28	118.00
IUUC-Tme-127043	Tuber melanosporum	48.90	2.00e-66	244.00
IUUC-Tbe-127927	Tupaia belangeri	39.42	1.00e-51	195.00
IUUC-Ttr-129231	Tursiops truncatus	39.05	3.00e-51	193.00
IUUC-Vda-129730	Verticillium dahliae	41.61	2.00e-57	214.00
IUUC-Vvi-130968	Vitis vinifera	35.77	2.00e-38	150.00
IUUC-Xtr-132203	Xenopus tropicalis	42.44	2.00e-56	210.00
IUUC-Xma-133972	Xiphophorus maculatus	39.42	2.00e-54	203.00
IUUC-Yli-134553	Yarrowia lipolytica	42.86	1.00e-51	194.00
IUUC-Zma-134941	Zea mays	35.71	8.00e-33	132.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence