iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005577

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348719

Gene Name

ARALYDRAFT_914907

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_702649.1	scaffold_702649.1	scaffold_702649.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.80e-07	29.9	115	157

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlp....CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl +f+   +vl+    C Hvfh++C+  w         + +CP+Cr
   Q: 115  CAICLLEFDG-DHVLRllttCYHVFHQECIDLW------FESHRTCPVCR 157
           ******9944.455444456*************......9999******8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSTIIPSPLP PQPPPPQPPP QHYVTPPLTV ILTVILLVFF FIGFFTLYFC KCFLDTMMQA 60
WRLHHGGDTV SDNPLQPPEA PPVNPGLDLR IINSFPTFPY SSVKDLREEK YGLECAICLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCAGTCTCC GGCCAACTTA ATGTCGACAA TAATTCCTTC ACCTCTGCCA CCGCAACCTC 60
CGCCACCGCA ACCTCCGCCA CAACATTACG TTACACCGCC TCTCACGGTG ATCCTCACCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_914907

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007042	Arabidopsis thaliana	96.34	3.00e-141	493.00
IUUC-Bol-015459	Brassica oleracea	82.37	2.00e-115	407.00
IUUC-Bra-018021	Brassica rapa	81.65	1.00e-110	392.00
IUUC-Gma-042843	Glycine max	43.17	8.00e-50	189.00
IUUC-Mtr-058535	Medicago truncatula	43.32	1.00e-50	192.00
IUUC-Pop-099444	Populus trichocarpa	44.21	9.00e-49	186.00
IUUC-Ppe-101206	Prunus persica	47.93	3.00e-55	207.00
IUUC-Sly-111357	Solanum lycopersicum	43.83	6.00e-49	186.00
IUUC-Stu-112179	Solanum tuberosum	54.87	1.00e-34	140.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence