iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099975

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000344

Gene Name

POPTR_0008s08690g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s08690	POPTR_0008s08690.1	POPTR_0008s08690.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.10e-08	33.6	115	156

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCle+ + g  ++ +pC+H fh +C++kw       + + +CP+Cr
   Q: 115  CAICLEEWEPGavVKEMPCKHRFHGNCVEKW------LKIHGNCPVCR 156
           ******996663355599*************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MASETELPAE LSSMFERLLR HRDLSLFLPF IFGFTSTNST EERDPDQEPQ TTDPNERIIL 60
INPLTQGMVV IEGAASLESL LRDIGNKNGQ PPASKASIEA MPSVEIGEDN KDGECAICLE 120

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Nucleotide Sequence
(Fasta)

CGCCGTTGTT TCCCTTATAA TCTCCATCAC TTGAACCTTG TCTATATCTC TCACAATTCG 60
CTAAAAATCT AAACCTCCTC TCCCTCTCTC CAAATCTAAA ATACCAGTAG TGGTACCTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0008s08690g

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence