iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.2__1483__AT1G72200.1	fgenesh2_kg.2__1483__AT1G72200.1	fgenesh2_kg.2__1483__AT1G72200.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.70e-07	29.9	144	186

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++ +++ p C Hvfh  C+ +w         +++CPlCr
   Q: 144  CPVCLNEFedDETLRLIPkCCHVFHPGCIDAW------LHSHATCPLCR 186
           ********65333888889*************......99********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MNPKGNNNLN RSIIGGHDHG SILQLLLFLL LLSSHGGFQL VAGQATHGGS DVPGDSSRFD 60
PTMAILMIVL VSVFFFLGFF SVYIRRCLER VMGMDYGNPN DAGNWFATNL QQARGLDASV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAGGGAAAG AAATAAGACA AAGGTTATTG TTTTTCATTG CATGGACCGG AGAGCCAAAC 60
CGACGAAAGT TTGGTCCTCA TGAACCCCAA AGGTAATAAT AATCTCAACC GTTCAATCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_476353

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007498	Arabidopsis thaliana	90.59	0.00e+00	696.00
IUUC-Bol-015643	Brassica oleracea	76.28	1.00e-167	581.00
IUUC-Bra-017965	Brassica rapa	76.66	3.00e-175	606.00
IUUC-Gma-043872	Glycine max	43.01	3.00e-55	208.00
IUUC-Mtr-057966	Medicago truncatula	39.77	7.00e-63	233.00
IUUC-Ppa-095490	Physcomitrella patens	45.00	2.00e-29	121.00
IUUC-Pop-099890	Populus trichocarpa	43.03	1.00e-42	166.00
IUUC-Smo-108906	Selaginella moellendorffii	51.95	9.00e-24	100.00
IUUC-Stu-112280	Solanum tuberosum	40.44	3.00e-66	244.00
IUUC-Tca-121082	Theobroma cacao	47.63	1.00e-79	289.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence