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Tag Content
UUCD2 ID IUUC-Aly-005769
UUCD1 version UUC-ArL-01045
Ensembl Protein ID scaffold_100257.1
UniProt Accession D7KCB5; D7KCB5_ARALL
Genbank Protein ID EFH65696.1
Protein Name tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; WD repeat-containing protein 4 homolog
Genbank Nucleotide ID GL348713
Gene Name TRM82; ARALYDRAFT_887463
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
scaffold_100257.1 scaffold_100257.1 scaffold_100257.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.70e-16 60.3 201 243
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf......sdtllvsGsdDgtikvWDlrtgvllk 37
           gH++ +tc af      + ++l sGs+D t+++WD+++g ll 
   Q: 201  GHSEFITCTAFvstpelTQGYLMSGSGDSTVRLWDITSGSLLD 243
           89999*******997743399*****************99875 PP
   
Organism Arabidopsis lyrata
Functional Description
(View)

Functional Description


     Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.
 Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.
Protein Sequence
(Fasta)
MEEESHTEEV EIQNKLEVAP ALISVHPSQK SLAVAVGSDL RVFNLIENRP VSLVDESDGP 60
SRKESIRAIR YSASGKLFVS AGDDKLVKIW STDSWRCLNT VCSEKRVSAV AISSDDSHVC 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Aly-005769|E3,WD_repeat|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TTTTTTGCTC TCTGTGTAAC AATGGAGGAA GAATCTCACA CCGAAGAAGT AGAAATCCAA 60
AACAAACTCG AAGTTGCTCC TGCATTGATT TCCGTTCATC CATCTCAGAA ATCTCTCGCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Aly-005769|E3,WD_repeat|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0819--tRNA processing
KW-0853--WD repeat
Interpro

IPR028884--Trm82
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0005634--C:nucleus
GO:0008618--P:7-methylguanosine metabolic process
GO:0036265--P:RNA (guanine-N7)-methylation
GO:0030488--P:tRNA methylation
KEGG aly:ARALYDRAFT_887463
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000556 Aegilops tauschii 49.15 3.00e-93 334.00
IUUC-Atr-002431 Amborella trichopoda 53.91 3.00e-35 140.00
IUUC-Apl-003975 Anas platyrhynchos 32.13 2.00e-28 119.00
IUUC-Aca-005170 Anolis carolinensis 35.03 7.00e-16 77.80
IUUC-Ath-006733 Arabidopsis thaliana 96.29 0.00e+00 747.00
IUUC-Acl-008151 Aspergillus clavatus 25.21 8.00e-12 64.30
IUUC-Afl-008518 Aspergillus flavus 27.82 2.00e-14 72.80
IUUC-Aor-010133 Aspergillus oryzae 25.31 1.00e-15 77.40
IUUC-Ame-010613 Astyanax mexicanus 31.39 8.00e-26 110.00
IUUC-Bgr-012067 Blumeria graminis 30.72 4.00e-12 65.50
IUUC-Bta-012788 Bos taurus 30.36 6.00e-25 107.00
IUUC-Bdi-014458 Brachypodium distachyon 52.51 3.00e-103 368.00
IUUC-Bol-015373 Brassica oleracea 82.12 4.00e-174 604.00
IUUC-Bra-016644 Brassica rapa 81.77 0.00e+00 628.00
IUUC-Cpo-021963 Cavia porcellus 34.13 3.00e-23 102.00
IUUC-Csa-024148 Chlorocebus sabaeus 33.17 9.00e-17 80.50
IUUC-Cne-026834 Cryptococcus neoformans 27.66 3.00e-15 76.30
IUUC-Dre-028427 Danio rerio 32.22 2.00e-25 109.00
IUUC-Dor-030522 Dipodomys ordii 28.69 3.00e-26 112.00
IUUC-Dme-032136 Drosophila melanogaster 39.36 6.00e-13 67.80
IUUC-Fca-035833 Felis catus 29.64 4.00e-22 98.20
IUUC-Fal-037497 Ficedula albicollis 32.53 2.00e-27 116.00
IUUC-Gga-040547 Gallus gallus 29.85 1.00e-24 107.00
IUUC-Gac-041761 Gasterosteus aculeatus 31.50 6.00e-23 100.00
IUUC-Gma-043722 Glycine max 60.72 5.00e-135 473.00
IUUC-Ggo-045340 Gorilla gorilla 29.10 5.00e-16 78.20
IUUC-Hsa-046403 Homo sapiens 29.39 2.00e-17 82.80
IUUC-Hvu-047643 Hordeum vulgare 51.57 9.00e-107 379.00
IUUC-Itr-048103 Ictidomys tridecemlineatus 31.11 9.00e-27 114.00
IUUC-Kpa-049283 Komagataella pastoris 31.48 5.00e-16 78.20
IUUC-Lch-050682 Latimeria chalumnae 34.55 9.00e-28 117.00
IUUC-Lpe-050712 Leersia perrieri 51.20 7.00e-112 396.00
IUUC-Loc-052599 Lepisosteus oculatus 30.64 1.00e-28 120.00
IUUC-Laf-054390 Loxodonta africana 31.06 1.00e-26 113.00
IUUC-Mcc-054747 Macaca mulatta 29.96 1.00e-17 83.20
IUUC-Mtr-058600 Medicago truncatula 60.77 1.00e-138 485.00
IUUC-Mla-059135 Melampsora laricipopulina 29.79 4.00e-18 85.50
IUUC-Mga-059876 Meleagris gallopavo 29.48 3.00e-25 108.00
IUUC-Mmr-061518 Microcebus murinus 32.10 5.00e-22 98.20
IUUC-Mac-065625 Musa acuminata 53.83 6.00e-113 400.00
IUUC-Nfi-068402 Neosartorya fischeri 25.81 2.00e-10 60.10
IUUC-Nle-069914 Nomascus leucogenys 28.63 2.00e-14 73.20
IUUC-Ont-071555 Oreochromis niloticus 29.58 5.00e-24 104.00
IUUC-Oan-072951 Ornithorhynchus anatinus 29.67 2.00e-25 108.00
IUUC-Ocu-074679 Oryctolagus cuniculus 31.82 2.00e-18 86.30
IUUC-Oba-075355 Oryza barthii 48.69 2.00e-101 362.00
IUUC-Obr-076769 Oryza brachyantha 53.32 8.00e-121 426.00
IUUC-Ogl-077168 Oryza glaberrima 52.27 6.00e-116 410.00
IUUC-Ogu-078275 Oryza glumaepatula 48.22 7.00e-100 357.00
IUUC-Oin-079207 Oryza indica 52.27 6.00e-116 410.00
IUUC-Ome-081169 Oryza meridionalis 35.77 5.00e-53 201.00
IUUC-Oni-082437 Oryza nivara 48.33 1.00e-100 359.00
IUUC-Opu-084031 Oryza punctata 52.27 3.00e-114 404.00
IUUC-Oru-084380 Oryza rufipogon 48.46 2.00e-100 358.00
IUUC-Osa-085327 Oryza sativa 52.03 2.00e-115 408.00
IUUC-Ola-086716 Oryzias latipes 30.71 4.00e-24 104.00
IUUC-Olu-087708 Ostreococcus lucimarinus 34.90 8.00e-40 157.00
IUUC-Oar-090239 Ovis aries 30.65 2.00e-24 106.00
IUUC-Ptr-090851 Pan troglodytes 28.98 4.00e-16 78.60
IUUC-Pan-092558 Papio anubis 33.17 9.00e-17 80.90
IUUC-Psi-093792 Pelodiscus sinensis 29.14 3.00e-23 102.00
IUUC-Ppa-095757 Physcomitrella patens 40.14 7.00e-70 257.00
IUUC-Pfo-096465 Poecilia formosa 29.12 9.00e-24 103.00
IUUC-Pab-097722 Pongo abelii 29.44 1.00e-17 83.20
IUUC-Pop-098979 Populus trichocarpa 61.27 1.00e-141 495.00
IUUC-Pca-100753 Procavia capensis 34.52 3.00e-18 85.90
IUUC-Ppe-101515 Prunus persica 66.27 3.00e-149 520.00
IUUC-Sja-107780 Schizosaccharomyces japonicus 24.84 8.00e-16 77.40
IUUC-Spo-108251 Schizosaccharomyces pombe 24.23 5.00e-12 65.10
IUUC-Smo-108938 Selaginella moellendorffii 40.65 5.00e-69 254.00
IUUC-Sit-110020 Setaria italica 52.29 2.00e-115 408.00
IUUC-Sly-111543 Solanum lycopersicum 60.29 5.00e-140 490.00
IUUC-Stu-111925 Solanum tuberosum 60.05 7.00e-142 496.00
IUUC-Sbi-114061 Sorghum bicolor 52.12 2.00e-117 414.00
IUUC-Tgu-117321 Taeniopygia guttata 31.73 1.00e-22 100.00
IUUC-Tru-118454 Takifugu rubripes 31.80 2.00e-26 112.00
IUUC-Tni-119894 Tetraodon nigroviridis 30.17 5.00e-22 97.80
IUUC-Tca-121746 Theobroma cacao 65.87 2.00e-146 511.00
IUUC-Tae-124459 Triticum aestivum 53.01 4.00e-110 390.00
IUUC-Tur-126254 Triticum urartu 48.96 2.00e-86 311.00
IUUC-Tbe-127683 Tupaia belangeri 47.73 8.00e-15 74.30
IUUC-Ttr-129056 Tursiops truncatus 35.64 2.00e-23 102.00
IUUC-Vvi-131428 Vitis vinifera 63.27 4.00e-152 530.00
IUUC-Xma-133605 Xiphophorus maculatus 28.57 1.00e-22 99.80
Created Date 25-Jun-2017

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