iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-004069

Ensembl Protein ID

ENSAPLP00000005395.1

UniProt Accession

R0KN34; R0KN34_ANAPL

Genbank Protein ID

EOA94618.1

Protein Name

60S ribosomal protein L40

Genbank Nucleotide ID

ADON01133634

Gene Name

UBA52; Anapl_19049

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000005829.1	ENSAPLT00000006025.1	ENSAPLP00000005395.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	1.20e-06	28.0	2	30

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 47   GkiLeddktLadyglkdgstihllekksg 75
           Gk Led++tLady+++ +st+hl+++ +g
   Q: 2    GKQLEDGRTLADYNIQKESTLHLVLRLRG 30
           9************************9987 PP

Organism

Anas platyrhynchos

Protein Sequence
(Fasta)

AGKQLEDGRT LADYNIQKES TLHLVLRLRG GIIEPSLRQL AQKYNCDKMI CRKCYARLHP 60
RAVNCRKKKC GHTNNLRPKK KVK 83

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGGCAAGC AGCTGGAGGA TGGCCGCACG CTCGCCGACT ACAACATCCA GAAAGGTGCC 60
TGTGGTGGAG GAGCCTTGCA CACGGATTTG GGACCCCCGG GNNNNNNNNN NNNNNNNNNN 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0689--Ribosomal protein

Interpro

IPR001975--Ribosomal_L40e
IPR011332--Ribosomal_zn-bd
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF01020--Ribosomal_L40e
PF00240--ubiquitin

SMART

SM01377--Ribosomal_L40e

Gene Ontology

GO:0005840--C:ribosome
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001246	Ailuropoda melanoleuca	98.80	7.00e-45	171.00
IUUC-Atr-003081	Amborella trichopoda	87.69	2.00e-29	120.00
IUUC-Ath-007098	Arabidopsis thaliana	91.57	4.00e-41	159.00
IUUC-Acl-008350	Aspergillus clavatus	87.95	3.00e-39	153.00
IUUC-Afl-008554	Aspergillus flavus	87.95	1.00e-39	154.00
IUUC-Afu-008984	Aspergillus fumigatus	86.75	7.00e-39	152.00
IUUC-Ang-009609	Aspergillus niger	87.95	2.00e-39	153.00
IUUC-Aor-009991	Aspergillus oryzae	87.95	3.00e-39	152.00
IUUC-Ate-010252	Aspergillus terreus	87.95	1.00e-39	156.00
IUUC-Ame-010785	Astyanax mexicanus	96.39	1.00e-43	167.00
IUUC-Bgr-012115	Blumeria graminis	87.95	1.00e-39	155.00
IUUC-Bta-013360	Bos taurus	98.80	7.00e-45	171.00
IUUC-Bci-013851	Botrytis cinerea	86.75	1.00e-39	154.00
IUUC-Bdi-014499	Brachypodium distachyon	90.36	1.00e-40	157.00
IUUC-Bol-015961	Brassica oleracea	91.57	5.00e-41	159.00
IUUC-Cja-019572	Callithrix jacchus	98.80	7.00e-45	171.00
IUUC-Cfa-020339	Canis familiaris	98.80	7.00e-45	171.00
IUUC-Cpo-021534	Cavia porcellus	98.80	7.00e-45	171.00
IUUC-Cre-022567	Chlamydomonas reinhardtii	89.16	1.00e-39	154.00
IUUC-Csa-023398	Chlorocebus sabaeus	98.80	7.00e-45	171.00
IUUC-Cin-025266	Ciona intestinalis	91.57	2.00e-41	160.00
IUUC-Csv-026105	Ciona savignyi	91.46	7.00e-41	158.00
IUUC-Cgl-026502	Colletotrichum gloeosporioides	87.95	8.00e-40	158.00
IUUC-Dre-028761	Danio rerio	96.39	6.00e-44	168.00
IUUC-Dno-028899	Dasypus novemcinctus	97.59	1.00e-43	167.00
IUUC-Dme-031588	Drosophila melanogaster	95.18	4.00e-43	166.00
IUUC-Ete-033120	Echinops telfairi	98.80	7.00e-45	171.00
IUUC-Eca-033787	Equus caballus	98.80	7.00e-45	171.00
IUUC-Fca-035725	Felis catus	98.80	7.00e-45	171.00
IUUC-Fox-037870	Fusarium oxysporum	87.95	4.00e-40	155.00
IUUC-Gmo-039163	Gadus morhua	96.39	8.00e-44	168.00
IUUC-Ggr-040034	Gaeumannomyces graminis	87.95	3.00e-40	157.00
IUUC-Gga-040909	Gallus gallus	100.00	4.00e-45	172.00
IUUC-Gac-041640	Gasterosteus aculeatus	97.59	2.00e-44	170.00
IUUC-Gma-043254	Glycine max	91.57	3.00e-41	160.00
IUUC-Ggo-045411	Gorilla gorilla	98.80	7.00e-45	171.00
IUUC-Hsa-046609	Homo sapiens	73.87	2.00e-39	154.00
IUUC-Itr-048586	Ictidomys tridecemlineatus	98.80	2.00e-45	174.00
IUUC-Lch-049971	Latimeria chalumnae	95.18	5.00e-43	167.00
IUUC-Loc-052117	Lepisosteus oculatus	97.59	1.00e-44	171.00
IUUC-Lma-053049	Leptosphaeria maculans	91.57	4.00e-41	159.00
IUUC-Laf-054284	Loxodonta africana	98.80	2.00e-45	174.00
IUUC-Mcc-055710	Macaca mulatta	96.47	1.00e-43	169.00
IUUC-Meu-056411	Macropus eugenii	98.80	7.00e-45	171.00
IUUC-Mor-057008	Magnaporthe oryzae	85.54	6.00e-39	152.00
IUUC-Mpo-057360	Magnaporthe poae	86.75	6.00e-40	155.00
IUUC-Mtr-058437	Medicago truncatula	90.36	3.00e-40	156.00
IUUC-Mmr-061335	Microcebus murinus	98.80	1.00e-44	171.00
IUUC-Mdo-062752	Monodelphis domestica	98.80	7.00e-45	171.00
IUUC-Mmu-063548	Mus musculus	98.80	3.00e-45	174.00
IUUC-Mac-064915	Musa acuminata	90.36	2.00e-40	157.00
IUUC-Mpu-066513	Mustela putorius furo	98.80	7.00e-45	171.00
IUUC-Mlu-068010	Myotis lucifugus	96.39	5.00e-44	169.00
IUUC-Nfi-068358	Neosartorya fischeri	87.95	2.00e-39	153.00
IUUC-Ncr-068799	Neurospora crassa	87.95	4.00e-40	155.00
IUUC-Opr-070655	Ochotona princeps	98.80	7.00e-45	171.00
IUUC-Ont-072180	Oreochromis niloticus	98.77	8.00e-44	168.00
IUUC-Oan-073196	Ornithorhynchus anatinus	98.80	7.00e-45	171.00
IUUC-Oba-075092	Oryza barthii	91.57	3.00e-41	159.00
IUUC-Obr-076156	Oryza brachyantha	91.57	3.00e-41	160.00
IUUC-Ogl-077471	Oryza glaberrima	91.57	3.00e-41	159.00
IUUC-Ogu-078259	Oryza glumaepatula	91.57	3.00e-41	159.00
IUUC-Oin-079901	Oryza indica	91.57	3.00e-41	159.00
IUUC-Ome-081343	Oryza meridionalis	91.57	3.00e-41	159.00
IUUC-Opu-083839	Oryza punctata	68.60	2.00e-22	100.00
IUUC-Oru-085252	Oryza rufipogon	91.57	3.00e-41	159.00
IUUC-Ola-086333	Oryzias latipes	96.39	4.00e-44	169.00
IUUC-Olu-087819	Ostreococcus lucimarinus	84.34	2.00e-36	143.00
IUUC-Oga-088027	Otolemur garnettii	98.80	7.00e-45	171.00
IUUC-Oar-090419	Ovis aries	98.80	7.00e-45	171.00
IUUC-Ptr-091593	Pan troglodytes	98.80	7.00e-45	171.00
IUUC-Psi-093654	Pelodiscus sinensis	98.80	7.00e-45	171.00
IUUC-Ppa-095174	Physcomitrella patens	90.36	1.00e-40	157.00
IUUC-Pfo-096492	Poecilia formosa	97.59	2.00e-44	170.00
IUUC-Pab-098004	Pongo abelii	98.80	7.00e-45	171.00
IUUC-Pop-098929	Populus trichocarpa	90.36	2.00e-40	157.00
IUUC-Ppe-101497	Prunus persica	92.77	3.00e-41	159.00
IUUC-Pva-102945	Pteropus vampyrus	98.80	7.00e-45	171.00
IUUC-Pte-104101	Pyrenophora teres	91.57	2.00e-41	160.00
IUUC-Pyt-104639	Pyrenophora triticirepentis	91.57	5.00e-41	159.00
IUUC-Rno-105290	Rattus norvegicus	98.80	7.00e-45	171.00
IUUC-Sce-106249	Saccharomyces cerevisiae	86.75	2.00e-39	153.00
IUUC-Sha-106570	Sarcophilus harrisii	98.80	7.00e-45	171.00
IUUC-Sja-107834	Schizosaccharomyces japonicus	89.16	3.00e-40	156.00
IUUC-Spo-108045	Schizosaccharomyces pombe	87.95	2.00e-39	153.00
IUUC-Ssl-108670	Sclerotinia sclerotiorum	87.95	6.00e-40	155.00
IUUC-Smo-109414	Selaginella moellendorffii	90.57	3.00e-23	99.00
IUUC-Sly-111884	Solanum lycopersicum	90.36	2.00e-40	157.00
IUUC-Sar-112942	Sorex araneus	95.18	1.00e-43	167.00
IUUC-Sbi-114790	Sorghum bicolor	90.36	2.00e-40	156.00
IUUC-Ssc-116417	Sus scrofa	98.80	7.00e-45	171.00
IUUC-Tru-117557	Takifugu rubripes	96.39	8.00e-44	168.00
IUUC-Tni-119715	Tetraodon nigroviridis	96.39	8.00e-44	168.00
IUUC-Tca-121404	Theobroma cacao	91.57	6.00e-41	159.00
IUUC-Tvi-122611	Trichoderma virens	86.75	7.00e-40	155.00
IUUC-Tae-123019	Triticum aestivum	90.36	2.00e-40	157.00
IUUC-Tur-126527	Triticum urartu	90.36	1.00e-40	157.00
IUUC-Tme-127138	Tuber melanosporum	89.16	2.00e-40	157.00
IUUC-Ttr-128939	Tursiops truncatus	98.80	7.00e-45	171.00
IUUC-Vda-129775	Verticillium dahliae	86.75	3.00e-39	153.00
IUUC-Vvi-130859	Vitis vinifera	92.77	1.00e-41	161.00
IUUC-Xtr-131921	Xenopus tropicalis	98.80	7.00e-45	171.00
IUUC-Xma-134071	Xiphophorus maculatus	97.59	2.00e-44	170.00
IUUC-Yli-134671	Yarrowia lipolytica	87.95	2.00e-39	153.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence