iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005521

UUCD1 version

UUC-ArL-01055

Ensembl Protein ID

fgenesh1_pm.C_scaffold_2001749

UniProt Accession

D7KV71; D7KV71_ARALL

Genbank Protein ID

EFH63975.1

Protein Name

At1g78070/F28K19_28

Genbank Nucleotide ID

GL348714

Gene Name

ARALYDRAFT_316716

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_2001749	fgenesh1_pm.C_scaffold_2001749	fgenesh1_pm.C_scaffold_2001749

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-07	30.5	319	351

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d  ++ a+ ++  +l++G+ D t+++WD+r
   Q: 319  GHLDYSFSSAWhPNgQILATGNQDTTCRLWDIR 351
           89999*******77799**************87 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDIFDNSDLE YLVDEFHADF DDDEPFAEVD IASDSDSDFM DSDFDFELSQ SKTNNDTSAL 60
EARNGKDIQG IPWESMNYTR GRYRENRLLH YKNFESLFRS REELYKDCLQ VEKGKNFYDF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATATTT TCGACAACTC TGATCTTGAA TACCTTGTGG ATGAGTTTCA CGCTGATTTC 60
GATGATGATG AACCCTTTGC AGAGGTCGAT ATCGCCAGTG ATTCTGATTC TGATTTCATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_316716

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000486	Aegilops tauschii	58.68	3.00e-151	527.00
IUUC-Atr-002734	Amborella trichopoda	66.52	3.00e-176	610.00
IUUC-Ath-007611	Arabidopsis thaliana	95.10	0.00e+00	855.00
IUUC-Bol-015183	Brassica oleracea	83.59	0.00e+00	771.00
IUUC-Bra-017403	Brassica rapa	83.15	0.00e+00	765.00
IUUC-Gma-044288	Glycine max	73.57	0.00e+00	636.00
IUUC-Hvu-047718	Hordeum vulgare	64.91	3.00e-158	550.00
IUUC-Lpe-051582	Leersia perrieri	64.41	9.00e-159	552.00
IUUC-Mtr-058564	Medicago truncatula	73.93	0.00e+00	628.00
IUUC-Mac-065012	Musa acuminata	63.64	9.00e-154	536.00
IUUC-Obr-076093	Oryza brachyantha	62.94	2.00e-156	544.00
IUUC-Ogu-078133	Oryza glumaepatula	64.29	2.00e-157	548.00
IUUC-Oin-079185	Oryza indica	61.14	9.00e-153	532.00
IUUC-Olo-080502	Oryza longistaminata	56.02	3.00e-139	487.00
IUUC-Oni-082850	Oryza nivara	64.04	8.00e-157	546.00
IUUC-Osa-085692	Oryza sativa	57.11	5.00e-142	496.00
IUUC-Smo-109252	Selaginella moellendorffii	62.37	6.00e-154	536.00
IUUC-Sit-110668	Setaria italica	63.68	1.00e-149	521.00
IUUC-Sly-111186	Solanum lycopersicum	71.86	5.00e-179	619.00
IUUC-Stu-111950	Solanum tuberosum	72.36	1.00e-180	625.00
IUUC-Sbi-113990	Sorghum bicolor	62.98	6.00e-159	553.00
IUUC-Tca-121603	Theobroma cacao	62.17	1.00e-166	578.00
IUUC-Tae-123702	Triticum aestivum	64.47	1.00e-155	541.00
IUUC-Tur-126710	Triticum urartu	52.49	1.00e-140	492.00
IUUC-Vvi-131311	Vitis vinifera	71.40	0.00e+00	664.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence