iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099097

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_551425; POPTR_0002s08140g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s08140	POPTR_0002s08140.1	POPTR_0002s08140.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.20e-06	28.0	159	199

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C iC+ ++  ++ ++ l+C H +h +C+ +w       + + +CP+C
   Q: 159  CVICQMEYeeDESLVALSCDHPYHPECIANW------LQINKICPIC 199
           ****999965445999***************......********** PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDNDGRKELV EDEERKQASS RVCYTQLEQV HSDFAIAMVL QEQERAFTIL TSIESDSNEE 60
ESDEASSSES GADDNDYEFF QSHEFESEME FLQEGEDSNS DEDMEEDEVD PDELSYEDLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTCTGTCC TTGACTGCAA CTATTTCAAG ATATTATCAG TAGTCTTATT CGATGGACAA 60
TGATGGGAGA AAAGAGCTGG TGGAGGATGA AGAGAGAAAA CAGGCATCGA GTAGGGTCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0002s08140g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015497	Brassica oleracea	56.03	3.00e-32	130.00
IUUC-Bra-017551	Brassica rapa	51.77	2.00e-32	130.00
IUUC-Gma-043482	Glycine max	48.24	6.00e-34	136.00
IUUC-Ppe-101579	Prunus persica	57.65	1.00e-43	168.00
IUUC-Tca-121227	Theobroma cacao	55.22	1.00e-50	192.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence