iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095930

Ensembl Protein ID

PP1S127_6V6.1

UniProt Accession

A9S7U8; A9S7U8_PHYPA

Genbank Protein ID

EDQ72908.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544943

Gene Name

PHYPADRAFT_10132

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S127_6V6	PP1S127_6V6.1	PP1S127_6V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.50e-24	86.8	1529	1861

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNl..gNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw.....kskkkavsprellkalkkeaee...fs 85
           Gl+N   +  C++N v+Q+L++++ +re ll     ++++      + +++++l+++f  l      +s++ av+p +l  al+++ +    f+
   Q: 1529 GLRNEigQYNCFLNVVIQSLWHLRRFREELLA--DTSMQHV--HVGTPCVVCALRDIFLGLDtpvhnSSSRDAVAPIALRVALSALYPDsdlFK 1618
           6777633447**********************..3333333..35678***********99666677999999***999999998877645588 PP
   S: 86   gyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgk 179
           + + +Da+E+la++++ l++++      p  ++ ++++s+l + +++   + + ++ + lF+ ++ +q+ c++c+ +s r+ + + +  +++ +
   Q: 1619 QGQMNDASEVLAVIFECLHKAF-----VPNATFVGNSESSLARGSWDCYGE-HACMAHALFGLHVAEQMNCQSCHLES-RHLKYTAFFHHINAS 1705
           **********************.....788889999999999999988765.67********************9888.666777788888866 PP
   S: 180  eetkke......slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefple.Ldlsp.fc 265
             +  +      s++++L+    +++l ++       c  +q     + l++ P+v++  L +   + ++++ e i+  v+  +  Ld+   +c
   Q: 1706 ALRTAKvlyqesSMDELLKLVDMNDQLACDI-TDDGGCG-RQ-NHMHHLLQSAPHVFTTVLGWQ--NGRESF-EDITATVDAIDVaLDVGViYC 1793
           6554445566669999999999999999864.5555555.44.478899************999..555445.466666665555599998566 PP
   S: 266  tspeekqkekkkYeLiavvvHsGslssGHYvayvknekgk.WllfdDskVtev.keeevleetg...staYvlfYkr 337
             ++         +L++vv+++G     HY+++++n++ + W+ fdDs+V+++ +++ev ++++    ++ vlfY+ 
   Q: 1794 GLDK-----GFHHRLVSVVCYYG----LHYHCFAYNQELGrWVMFDDSTVKVIgEWKEVASTCRrghLQPQVLFYEA 1861
           6633.....7899**********....9********98878************556999998878988999999985 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MAQKKKASAF RTASVNIPVP SSQPNNAPVW LISSAPYDSD SREAVAVPEI QAGTVAEAFL 60
SETGGGQRKR DVTGPCKGDV TEKTLGKGVA PARLPNGAGK GLPIARSGGC KVTSGAKDET 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCAAA AGAAGAAAGC ATCCGCTTTT CGCACTGCTT CTGTAAATAT TCCTGTGCCC 60
TCTTCCCAGC CAAACAACGC TCCAGTGTGG TTGATTTCAT CTGCACCGTA TGATAGCGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006866--DUF627_N
IPR006865--DUF629
IPR001394--Peptidase_C19_UCH
IPR011990--TPR-like_helical_dom
IPR028889--USP_dom
IPR013087--Znf_C2H2_type

PROSITE

PS50235--USP_3
PS00028--ZINC_FINGER_C2H2_1
PS50157--ZINC_FINGER_C2H2_2

Pfam

PF04781--DUF627
PF04780--DUF629
PF00443--UCH

Gene Ontology

GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination

KEGG

ppp:PHYPADRAFT_10132

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000820	Aegilops tauschii	46.58	3.00e-53	201.00
IUUC-Aml-002136	Ailuropoda melanoleuca	31.78	3.00e-40	159.00
IUUC-Atr-002451	Amborella trichopoda	38.72	2.00e-165	576.00
IUUC-Apl-003843	Anas platyrhynchos	30.52	1.00e-40	161.00
IUUC-Aca-004689	Anolis carolinensis	31.52	4.00e-41	162.00
IUUC-Aly-005859	Arabidopsis lyrata	37.21	8.00e-145	508.00
IUUC-Ath-007147	Arabidopsis thaliana	36.32	8.00e-138	484.00
IUUC-Ame-010673	Astyanax mexicanus	32.50	1.00e-41	164.00
IUUC-Bta-012434	Bos taurus	32.78	2.00e-40	160.00
IUUC-Bol-015670	Brassica oleracea	51.97	6.00e-117	414.00
IUUC-Bra-016731	Brassica rapa	37.47	1.00e-154	540.00
IUUC-Cja-019625	Callithrix jacchus	32.05	4.00e-40	159.00
IUUC-Cfa-020038	Canis familiaris	30.98	5.00e-40	159.00
IUUC-Cpo-021503	Cavia porcellus	30.89	6.00e-40	159.00
IUUC-Csa-024021	Chlorocebus sabaeus	32.60	2.00e-40	160.00
IUUC-Cho-024422	Choloepus hoffmanni	28.41	1.00e-30	128.00
IUUC-Dre-028438	Danio rerio	30.94	4.00e-42	166.00
IUUC-Dno-029317	Dasypus novemcinctus	31.51	1.00e-39	157.00
IUUC-Dor-030249	Dipodomys ordii	32.38	1.00e-39	157.00
IUUC-Ete-032403	Echinops telfairi	31.25	2.00e-40	160.00
IUUC-Eca-033216	Equus caballus	30.98	2.00e-40	160.00
IUUC-Eeu-035319	Erinaceus europaeus	31.12	4.00e-18	86.70
IUUC-Fca-036414	Felis catus	32.05	1.00e-40	161.00
IUUC-Fal-036886	Ficedula albicollis	31.06	2.00e-41	164.00
IUUC-Gga-040930	Gallus gallus	30.52	5.00e-41	162.00
IUUC-Gac-041515	Gasterosteus aculeatus	31.55	4.00e-41	161.00
IUUC-Gma-043691	Glycine max	34.16	5.00e-146	511.00
IUUC-Ggo-045573	Gorilla gorilla	32.33	5.00e-40	159.00
IUUC-Hsa-046741	Homo sapiens	31.59	6.00e-40	159.00
IUUC-Itr-048229	Ictidomys tridecemlineatus	31.58	6.00e-40	159.00
IUUC-Lch-049932	Latimeria chalumnae	29.38	2.00e-37	150.00
IUUC-Lpe-051572	Leersia perrieri	47.85	1.00e-109	391.00
IUUC-Loc-052180	Lepisosteus oculatus	32.96	5.00e-42	166.00
IUUC-Laf-054545	Loxodonta africana	32.05	5.00e-41	162.00
IUUC-Mcc-054918	Macaca mulatta	32.60	2.00e-40	160.00
IUUC-Meu-056802	Macropus eugenii	27.25	2.00e-29	124.00
IUUC-Mtr-058682	Medicago truncatula	33.89	8.00e-140	491.00
IUUC-Mga-059684	Meleagris gallopavo	28.07	5.00e-35	142.00
IUUC-Mmr-060701	Microcebus murinus	29.62	2.00e-38	154.00
IUUC-Mdo-062636	Monodelphis domestica	30.52	1.00e-41	164.00
IUUC-Mmu-063480	Mus musculus	29.89	3.00e-39	157.00
IUUC-Mpu-066404	Mustela putorius furo	29.62	8.00e-39	155.00
IUUC-Mlu-067841	Myotis lucifugus	29.62	1.00e-38	155.00
IUUC-Nle-069276	Nomascus leucogenys	32.01	2.00e-40	160.00
IUUC-Opr-070676	Ochotona princeps	27.23	2.00e-17	84.70
IUUC-Ont-072449	Oreochromis niloticus	31.37	5.00e-42	165.00
IUUC-Oan-073551	Ornithorhynchus anatinus	30.35	1.00e-38	155.00
IUUC-Ocu-074729	Oryctolagus cuniculus	29.81	1.00e-38	155.00
IUUC-Oba-075174	Oryza barthii	54.09	4.00e-108	386.00
IUUC-Obr-076268	Oryza brachyantha	57.02	1.00e-120	427.00
IUUC-Ogl-077138	Oryza glaberrima	53.83	6.00e-123	435.00
IUUC-Oin-079125	Oryza indica	53.83	5.00e-123	435.00
IUUC-Olo-080872	Oryza longistaminata	50.00	1.00e-108	387.00
IUUC-Ome-081864	Oryza meridionalis	54.09	4.00e-107	383.00
IUUC-Oni-082109	Oryza nivara	54.09	4.00e-108	386.00
IUUC-Opu-083823	Oryza punctata	54.34	3.00e-124	439.00
IUUC-Oru-084310	Oryza rufipogon	54.09	3.00e-108	386.00
IUUC-Osa-085583	Oryza sativa	58.48	6.00e-122	430.00
IUUC-Ola-086742	Oryzias latipes	31.13	9.00e-40	157.00
IUUC-Oga-088920	Otolemur garnettii	29.62	1.00e-38	155.00
IUUC-Oar-089584	Ovis aries	32.78	2.00e-40	160.00
IUUC-Ptr-091610	Pan troglodytes	32.33	7.00e-40	159.00
IUUC-Pan-092190	Papio anubis	29.62	1.00e-38	155.00
IUUC-Psi-093643	Pelodiscus sinensis	31.98	2.00e-41	164.00
IUUC-Pfo-096829	Poecilia formosa	31.18	4.00e-42	166.00
IUUC-Pab-098190	Pongo abelii	32.33	3.00e-40	159.00
IUUC-Pop-099539	Populus trichocarpa	35.17	7.00e-160	558.00
IUUC-Pca-101005	Procavia capensis	28.41	5.00e-21	96.70
IUUC-Ppe-101918	Prunus persica	36.64	3.00e-146	512.00
IUUC-Pva-102372	Pteropus vampyrus	30.79	9.00e-40	158.00
IUUC-Rno-105463	Rattus norvegicus	29.12	3.00e-38	154.00
IUUC-Sha-107092	Sarcophilus harrisii	31.06	1.00e-41	164.00
IUUC-Sit-110021	Setaria italica	51.44	4.00e-123	436.00
IUUC-Sly-111258	Solanum lycopersicum	36.87	6.00e-164	571.00
IUUC-Stu-112904	Solanum tuberosum	35.89	1.00e-159	556.00
IUUC-Sar-113376	Sorex araneus	33.16	2.00e-21	97.80
IUUC-Sbi-114345	Sorghum bicolor	52.87	1.00e-127	451.00
IUUC-Ssc-115969	Sus scrofa	30.71	2.00e-40	160.00
IUUC-Tgu-117134	Taeniopygia guttata	31.06	2.00e-41	163.00
IUUC-Tru-117981	Takifugu rubripes	30.28	6.00e-38	150.00
IUUC-Tsy-119297	Tarsius syrichta	28.97	5.00e-29	122.00
IUUC-Tni-120116	Tetraodon nigroviridis	31.27	1.00e-39	156.00
IUUC-Tca-121692	Theobroma cacao	36.41	5.00e-165	575.00
IUUC-Tbe-127607	Tupaia belangeri	30.87	1.00e-39	158.00
IUUC-Ttr-128647	Tursiops truncatus	30.81	5.00e-37	149.00
IUUC-Vpa-130213	Vicugna pacos	29.62	7.00e-39	155.00
IUUC-Vvi-131652	Vitis vinifera	37.91	2.00e-157	550.00
IUUC-Xtr-132277	Xenopus tropicalis	33.43	8.00e-43	168.00
IUUC-Xma-133162	Xiphophorus maculatus	32.05	5.00e-41	162.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence