iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIAE_CS42_3B_TGACv1_221049_AA0728240	TRIAE_CS42_3B_TGACv1_221049_AA0728240.1	TRIAE_CS42_3B_TGACv1_221049_AA0728240.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-29	102.8	232	263
UBD/Beta-Prp	2.10e-55	190.7	56	276

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           Ht+s++++++ +d + +++ s D+t kvWD++
   Q: 232  HTGSIYAVSWsPDsKQVLTVSADKTAKVWDIS 263
           9**********999****************75 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvw.dvttgkllrslsgheaevtavkfspdgkilvtgseD.... 73
           h  + t+  fsp+++++a++ ++g+++vw ++ +  l +++   ++ v ++++spdg +++ +s D    
   Q: 56   HAYPTTVARFSPNGEWVASADASGCVRVWgRNGDRALKAEFRPISGRVDDLRWSPDG-MRIVVSGDgkgk 124
           667889999********************445566667888***************9.788888887999 PP
   S: 74   rtikvwdlstgkcvhtlkghedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvnc 142
            +++ +  ++g++v  + gh+++vls++f p++  ++v+ ++d  ++ ++ +  +  +   + h+ +vnc
   Q: 125  SLVRAFMWDSGSTVGEFDGHSKRVLSCDFKPTRpFRIVTCGEDFLANYYEGPPFKFKH-SIRDHTNFVNC 193
           9******************************99889*********************9.99********* PP
   S: 143  vvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tgghtdsvyslsfdsngkelvsgsldgtvklwdlq 210
           ++++pdg  +++ s D++  ++d ktg+ + +l  +g ht+s+y +s+++++k+++++s d+t k+wd++
   Q: 194  IRYSPDGTKFITVSSDKKGLIYDGKTGDKIGELssEGSHTGSIYAVSWSPDSKQVLTVSADKTAKVWDIS 263
           *********************************99899******************************** PP
   S: 211  ...tgecvrtlng 220
              +g+  rtl +
   Q: 264  edgSGTLNRTLVC 276
           9885655555444 PP

Organism

Triticum aestivum

Protein Sequence
(Fasta)

MAQLQETYAC SPATERGRGI LLAGDAKTET IAYCSGRSVI FRRLDAPLDA WAYTEHAYPT 60
TVARFSPNGE WVASADASGC VRVWGRNGDR ALKAEFRPIS GRVDDLRWSP DGMRIVVSGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAGCCGCCT ATGGCCGCGC CCGTCCCCGC GACCACCTCC GGCGTCCGGC GTCGGCGCCC 60
TGGAGCGTCC CCTCGTTCGT GCCCGTTCGG GTGGGTCCGC CCGGCCCACT TCGCCCAGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003160	Amborella trichopoda	71.19	0.00e+00	931.00
IUUC-Aly-006465	Arabidopsis lyrata	66.67	0.00e+00	853.00
IUUC-Ath-006740	Arabidopsis thaliana	66.17	0.00e+00	853.00
IUUC-Afu-008989	Aspergillus fumigatus	32.14	5.00e-75	276.00
IUUC-Ame-011269	Astyanax mexicanus	41.36	8.00e-42	165.00
IUUC-Bgr-011996	Blumeria graminis	30.31	1.00e-74	275.00
IUUC-Bra-017139	Brassica rapa	66.61	0.00e+00	851.00
IUUC-Cel-018417	Caenorhabditis elegans	33.06	4.00e-82	299.00
IUUC-Cja-019952	Callithrix jacchus	35.29	5.00e-103	369.00
IUUC-Cgl-026597	Colletotrichum gloeosporioides	32.52	1.00e-80	294.00
IUUC-Dme-031597	Drosophila melanogaster	38.06	8.00e-113	401.00
IUUC-Ete-032780	Echinops telfairi	33.22	5.00e-91	329.00
IUUC-Gmo-039238	Gadus morhua	35.68	2.00e-102	367.00
IUUC-Ggr-039830	Gaeumannomyces graminis	32.57	1.00e-73	271.00
IUUC-Gac-042363	Gasterosteus aculeatus	36.81	5.00e-107	382.00
IUUC-Gma-042924	Glycine max	67.82	0.00e+00	901.00
IUUC-Ggo-044632	Gorilla gorilla	34.47	1.00e-98	354.00
IUUC-Hsa-045792	Homo sapiens	34.97	1.00e-106	380.00
IUUC-Itr-048076	Ictidomys tridecemlineatus	35.08	2.00e-106	380.00
IUUC-Kpa-049183	Komagataella pastoris	32.35	5.00e-80	292.00
IUUC-Mtr-057922	Medicago truncatula	68.15	0.00e+00	900.00
IUUC-Mvi-060448	Microbotryum violaceum	30.81	1.00e-67	251.00
IUUC-Mdo-062674	Monodelphis domestica	35.56	5.00e-108	385.00
IUUC-Mac-065124	Musa acuminata	73.44	0.00e+00	966.00
IUUC-Mpu-066001	Mustela putorius furo	33.39	6.00e-102	365.00
IUUC-Ncr-068948	Neurospora crassa	33.49	2.00e-86	313.00
IUUC-Nle-070115	Nomascus leucogenys	34.47	8.00e-94	338.00
IUUC-Ont-071666	Oreochromis niloticus	36.87	1.00e-103	371.00
IUUC-Ola-086968	Oryzias latipes	36.05	6.00e-111	395.00
IUUC-Oga-089108	Otolemur garnettii	34.47	1.00e-105	377.00
IUUC-Ptr-091281	Pan troglodytes	35.14	5.00e-106	379.00
IUUC-Pan-092585	Papio anubis	34.97	5.00e-103	369.00
IUUC-Pma-094542	Petromyzon marinus	33.44	7.00e-103	368.00
IUUC-Pno-095086	Phaeosphaeria nodorum	33.76	2.00e-85	310.00
IUUC-Ppa-095876	Physcomitrella patens	56.91	0.00e+00	729.00
IUUC-Pfo-096973	Poecilia formosa	36.16	5.00e-111	395.00
IUUC-Pab-098391	Pongo abelii	34.97	1.00e-102	368.00
IUUC-Pte-104365	Pyrenophora teres	35.12	5.00e-88	319.00
IUUC-Pyt-104689	Pyrenophora triticirepentis	35.61	2.00e-93	337.00
IUUC-Sce-106383	Saccharomyces cerevisiae	30.25	6.00e-64	239.00
IUUC-Spo-108309	Schizosaccharomyces pombe	33.50	2.00e-82	300.00
IUUC-Sly-110897	Solanum lycopersicum	68.52	0.00e+00	904.00
IUUC-Stu-111971	Solanum tuberosum	68.20	0.00e+00	904.00
IUUC-Sar-113415	Sorex araneus	50.00	3.00e-32	133.00
IUUC-Tgu-117256	Taeniopygia guttata	35.46	6.00e-110	392.00
IUUC-Tca-121609	Theobroma cacao	67.62	0.00e+00	900.00
IUUC-Tme-127217	Tuber melanosporum	32.74	8.00e-82	298.00
IUUC-Tbe-127526	Tupaia belangeri	34.53	2.00e-103	370.00
IUUC-Vvi-131217	Vitis vinifera	70.82	0.00e+00	922.00
IUUC-Xtr-132860	Xenopus tropicalis	32.15	4.00e-87	316.00
IUUC-Xma-133830	Xiphophorus maculatus	36.48	1.00e-112	401.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence