iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099931

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000339

Gene Name

POPTRDRAFT_757629; POPTR_0003s13970g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s13970	POPTR_0003s13970.1	POPTR_0003s13970.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.90e-08	35.8	316	358

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+++  kd +++ p C H fha+C+  w       + +++CPlCr
   Q: 316  CPICLSEYqpKDTLRTIPdCSHYFHANCIDEW------LKMNATCPLCR 358
           ******9988776999999*************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAPSTLFLLV LSVLIFLQKA NSNKIPCHNP CLRNKLEVRF PFGFDNNRCR YPGFNLSCND 60
LQNQIILNLP NTGNFTVQNI NYRNQTVTIT DPQNCLPKKF MDSSFDLSGS PFIPEHYNHS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGCAGCCCG TCAACCAGAA ATAAATCAAT AATAAAACCC TGCCCATAAA AGCTTTGTAT 60
TTTTAGTTCC CAAAAAATGG CTCCTTCAAC TCTCTTCCTC TTAGTACTCT CTGTACTGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR025287--WAK_GUB
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13947--GUB_WAK_bind
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0030247--F:polysaccharide binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0003s13970g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-042761	Glycine max	40.26	8.00e-64	236.00
IUUC-Mtr-058115	Medicago truncatula	44.44	8.00e-62	230.00
IUUC-Olu-087781	Ostreococcus lucimarinus	46.38	3.00e-14	70.50
IUUC-Ppe-101231	Prunus persica	45.66	3.00e-75	275.00
IUUC-Pgr-103360	Puccinia graminis	50.88	1.00e-14	70.90
IUUC-Sly-111291	Solanum lycopersicum	43.39	1.00e-68	253.00
IUUC-Stu-112623	Solanum tuberosum	43.39	4.00e-69	254.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence