iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111909

Ensembl Protein ID

Solyc02g065540.1.1

UniProt Accession

K4B6Y6; K4B6Y6_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc02g065540.1	Solyc02g065540.1.1	Solyc02g065540.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.40e-07	30.3	24	79
E3 activity/RING/RING	5.40e-07	30.8	27	68

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwl..asggktcPvtrqplteedlvPn 58
           +f C I +el +dP v+ +G+ y   ++ +wl   s+ ++cPv+++ ++e++lvP 
   Q: 24   DFECNICFELAQDPIVTLCGHLYCWPCLYRWLrlHSQSHECPVCKALIQEQKLVPL 79
           699*****************************76556669**************96 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+e  +d p+v+ CgH+++  Cl++w    ++ s++  CP+C+
   Q: 27   CNICFELAQD-PIVTLCGHLYCWPCLYRW---LRLHSQSHECPVCK 68
           99********.999***************...777999999****7 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MQNSTSTTFE NSSSSGNGSN DAGDFECNIC FELAQDPIVT LCGHLYCWPC LYRWLRLHSQ 60
SHECPVCKAL IQEQKLVPLY GRGRTSTDPR SKPVPGVEIP RRPAGQRPET APPPESNTFP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGAACT CAACTTCCAC AACCTTTGAG AATTCGTCTT CCTCAGGGAA TGGCAGCAAT 60
GATGCTGGTG ATTTTGAATG CAACATCTGC TTTGAATTGG CACAAGATCC TATTGTGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

sly:101256837

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003744	Anas platyrhynchos	56.52	2.00e-21	93.20
IUUC-Bta-012734	Bos taurus	56.52	3.00e-21	94.00
IUUC-Cja-019136	Callithrix jacchus	56.52	2.00e-21	94.70
IUUC-Cpo-021347	Cavia porcellus	56.52	2.00e-21	94.40
IUUC-Csa-023755	Chlorocebus sabaeus	56.52	1.00e-21	95.10
IUUC-Dre-028094	Danio rerio	55.07	5.00e-21	93.20
IUUC-Dno-029402	Dasypus novemcinctus	56.52	2.00e-21	94.40
IUUC-Dor-030373	Dipodomys ordii	56.52	2.00e-21	94.40
IUUC-Ete-032786	Echinops telfairi	56.52	1.00e-21	95.10
IUUC-Gga-040514	Gallus gallus	56.52	2.00e-21	94.40
IUUC-Gma-043172	Glycine max	63.24	1.00e-61	228.00
IUUC-Lch-050658	Latimeria chalumnae	56.52	3.00e-21	94.00
IUUC-Laf-054438	Loxodonta africana	56.52	1.00e-21	95.10
IUUC-Meu-055984	Macropus eugenii	56.34	6.00e-21	92.80
IUUC-Mtr-058130	Medicago truncatula	57.56	7.00e-60	222.00
IUUC-Mga-059554	Meleagris gallopavo	56.52	2.00e-21	94.40
IUUC-Opr-070197	Ochotona princeps	57.38	4.00e-20	90.10
IUUC-Oan-073480	Ornithorhynchus anatinus	56.52	2.00e-21	94.40
IUUC-Obr-076382	Oryza brachyantha	62.91	7.00e-49	186.00
IUUC-Pan-092671	Papio anubis	56.52	1.00e-21	95.10
IUUC-Psi-093323	Pelodiscus sinensis	56.52	2.00e-21	94.70
IUUC-Pca-100319	Procavia capensis	52.34	3.00e-25	107.00
IUUC-Sha-107361	Sarcophilus harrisii	56.52	1.00e-21	95.10
IUUC-Sar-113669	Sorex araneus	54.35	3.00e-10	55.80
IUUC-Ttr-129044	Tursiops truncatus	56.52	2.00e-21	94.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence