iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ame-011098

Ensembl Protein ID

ENSAMXP00000020556.1

UniProt Accession

W5LL44; W5LL44_ASTMX

Genbank Protein ID

ENSAMXP00000020556

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

APWO01008919

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMXG00000019969.1	ENSAMXT00000020556.1	ENSAMXP00000020556.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.10e-16	61.0	448	492

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C vC++gge    l++C+ C + +H +Cl+++  +e pn e wiCp+C+
   Q: 448  EFCRVCKDGGE----LLCCDSCPSSYHIHCLNPP-LPEIPNGE-WICPRCT 492
           58*********....*******************.*******8.******6 PP

Organism

Astyanax mexicanus

Protein Sequence
(Fasta)

MSGSEDERDD FGPTEDRSML QDEELDEDLS ENEAPKVKKK KKAKKSSREG KNSKRQRSRR 60
EDIPISSPEP VEGHEVDEVD EDGARGRSDS EGSDYTPGKK KKKRASTSRD KKRNSAGAER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATCCTATGT TAGGTCAGCA CCTGCATGCA CACTTATTAG ACTGTACAGC AGGTCTGCAA 60
ACATGTACAG TAGTTTTGAG TGGGATTGAA GGAGTTGCCA TGTGACGTGT CTTTTTTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR009071--HMG_box_dom
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0031101--P:fin regeneration
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-004774	Anolis carolinensis	83.39	0.00e+00	2130.00
IUUC-Bta-013220	Bos taurus	82.14	0.00e+00	2106.00
IUUC-Cel-018108	Caenorhabditis elegans	58.63	0.00e+00	1341.00
IUUC-Cpo-021704	Cavia porcellus	82.08	0.00e+00	2118.00
IUUC-Cho-024361	Choloepus hoffmanni	82.19	0.00e+00	1356.00
IUUC-Cin-025596	Ciona intestinalis	53.77	8.00e-61	228.00
IUUC-Csv-025847	Ciona savignyi	59.37	0.00e+00	1369.00
IUUC-Dre-027505	Danio rerio	86.95	0.00e+00	2740.00
IUUC-Dno-029656	Dasypus novemcinctus	83.25	0.00e+00	2112.00
IUUC-Dme-032150	Drosophila melanogaster	62.49	0.00e+00	1423.00
IUUC-Fca-036056	Felis catus	83.25	0.00e+00	2112.00
IUUC-Gga-040216	Gallus gallus	78.48	0.00e+00	2512.00
IUUC-Gac-042478	Gasterosteus aculeatus	78.71	0.00e+00	2578.00
IUUC-Gma-043999	Glycine max	43.80	0.00e+00	737.00
IUUC-Itr-048002	Ictidomys tridecemlineatus	83.25	0.00e+00	2112.00
IUUC-Lch-049948	Latimeria chalumnae	74.71	0.00e+00	1808.00
IUUC-Loc-052144	Lepisosteus oculatus	89.76	0.00e+00	2201.00
IUUC-Mcc-055773	Macaca mulatta	80.93	0.00e+00	2116.00
IUUC-Mga-059633	Meleagris gallopavo	78.11	0.00e+00	2522.00
IUUC-Mmr-060886	Microcebus murinus	79.84	0.00e+00	2114.00
IUUC-Mdo-062872	Monodelphis domestica	85.73	0.00e+00	1924.00
IUUC-Mmu-063672	Mus musculus	82.08	0.00e+00	2107.00
IUUC-Mpu-066692	Mustela putorius furo	83.25	0.00e+00	2112.00
IUUC-Mlu-067785	Myotis lucifugus	83.12	0.00e+00	2105.00
IUUC-Nle-070039	Nomascus leucogenys	79.53	0.00e+00	2105.00
IUUC-Ont-072418	Oreochromis niloticus	82.54	0.00e+00	2701.00
IUUC-Ocu-074177	Oryctolagus cuniculus	82.29	0.00e+00	2127.00
IUUC-Ola-086880	Oryzias latipes	82.83	0.00e+00	2735.00
IUUC-Oar-090422	Ovis aries	82.14	0.00e+00	2106.00
IUUC-Pan-092441	Papio anubis	83.25	0.00e+00	2123.00
IUUC-Psi-093530	Pelodiscus sinensis	84.90	0.00e+00	2148.00
IUUC-Ppa-095213	Physcomitrella patens	41.86	0.00e+00	711.00
IUUC-Pfo-097530	Poecilia formosa	84.98	0.00e+00	2725.00
IUUC-Pva-103186	Pteropus vampyrus	80.80	0.00e+00	2098.00
IUUC-Smo-108946	Selaginella moellendorffii	38.44	2.00e-156	547.00
IUUC-Sly-110976	Solanum lycopersicum	43.49	0.00e+00	741.00
IUUC-Ssc-115295	Sus scrofa	83.25	0.00e+00	2110.00
IUUC-Tgu-117484	Taeniopygia guttata	83.16	0.00e+00	2138.00
IUUC-Tni-120764	Tetraodon nigroviridis	81.47	0.00e+00	2623.00
IUUC-Vvi-130849	Vitis vinifera	43.61	0.00e+00	738.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence