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Tag Content
iUUCD ID IUUC-Dre-028226
Ensembl Protein ID ENSDARP00000133704.1
UniProt Accession A0A0R4IJ89; A0A0R4IJ89_DANRE
Genbank Protein ID ENSDARP00000133704
Protein Name Chromodomain helicase DNA-binding protein 5
Genbank Nucleotide ID BX548000
Gene Name chd5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSDARG00000105083.1 ENSDART00000166969.1 ENSDARP00000133704.1
ENSDARG00000105083.1 ENSDART00000162587.1 ENSDARP00000135126.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/PHD 3.00e-16 60.2 352 397
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/PHD
   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C vC++gge    ++ C+ C +++H  Cl ++  e+ p+ + w Cp C++
   Q: 352  DYCEVCQQGGE----IILCDTCPRAYHLVCLDPE-LEKAPEGK-WSCPHCEK 397
           79*********....9******************.*******7.******86 PP
   
Organism Danio rerio
Protein Sequence
(Fasta)
MPGSLSNEDE GQDDMDFEDD VPDDEEGELQ RSVPLSPLER FFSEEDNVKQ HKKKKTSKIM 60
EGKEPKVKKK KKKEGLPSGL DDMSDREDHG HRSGSESSTY SALKKKKKKP REKKERKMKQ 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Dre-028226|E3,PHD|Danio rerio
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GTCTGGCTGA AAAGGCAGCG TGAGGGAACT TTCTCCCGGT TTAACCTCAG ATTCCTCGAA 60
CTTGAGCGGG AAAAGGGCAA CGCCAGACGG GAGTGCACGC CGCTCTCGCT AGTTAAGCCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Dre-028226|E3,PHD|Danio rerio
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR009071--HMG_box_dom
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N
SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD
Gene Ontology

GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001701 Ailuropoda melanoleuca 76.62 0.00e+00 2484.00
IUUC-Aca-004671 Anolis carolinensis 75.85 0.00e+00 2359.00
IUUC-Ame-011883 Astyanax mexicanus 87.37 0.00e+00 2917.00
IUUC-Bta-012868 Bos taurus 71.72 0.00e+00 2192.00
IUUC-Bra-016724 Brassica rapa 40.81 1.00e-158 555.00
IUUC-Cja-018871 Callithrix jacchus 82.27 0.00e+00 2070.00
IUUC-Cfa-021063 Canis familiaris 76.90 0.00e+00 2489.00
IUUC-Cpo-022083 Cavia porcellus 81.41 0.00e+00 2093.00
IUUC-Csa-023084 Chlorocebus sabaeus 81.70 0.00e+00 2142.00
IUUC-Ete-032757 Echinops telfairi 67.33 0.00e+00 1958.00
IUUC-Eca-034372 Equus caballus 77.54 0.00e+00 2483.00
IUUC-Fca-036048 Felis catus 77.10 0.00e+00 2504.00
IUUC-Fal-037282 Ficedula albicollis 76.00 0.00e+00 2508.00
IUUC-Gma-043999 Glycine max 41.90 0.00e+00 733.00
IUUC-Ggo-044514 Gorilla gorilla 77.55 0.00e+00 2541.00
IUUC-Hsa-046181 Homo sapiens 77.55 0.00e+00 2533.00
IUUC-Itr-048463 Ictidomys tridecemlineatus 72.04 0.00e+00 2173.00
IUUC-Loc-052795 Lepisosteus oculatus 83.13 0.00e+00 2826.00
IUUC-Laf-053749 Loxodonta africana 80.75 0.00e+00 2128.00
IUUC-Mcc-055856 Macaca mulatta 76.69 0.00e+00 2543.00
IUUC-Mga-059630 Meleagris gallopavo 79.27 0.00e+00 2419.00
IUUC-Mmr-061223 Microcebus murinus 70.72 0.00e+00 2161.00
IUUC-Mmu-063644 Mus musculus 77.78 0.00e+00 2546.00
IUUC-Mpu-066528 Mustela putorius furo 77.28 0.00e+00 2387.00
IUUC-Mlu-067355 Myotis lucifugus 71.93 0.00e+00 2174.00
IUUC-Nle-069824 Nomascus leucogenys 82.18 0.00e+00 1987.00
IUUC-Opr-070960 Ochotona princeps 70.25 0.00e+00 2140.00
IUUC-Ont-072647 Oreochromis niloticus 83.62 0.00e+00 2786.00
IUUC-Ola-086961 Oryzias latipes 80.19 0.00e+00 2660.00
IUUC-Oga-088775 Otolemur garnettii 79.22 0.00e+00 2390.00
IUUC-Ptr-090586 Pan troglodytes 76.38 0.00e+00 2505.00
IUUC-Pan-092282 Papio anubis 81.70 0.00e+00 2139.00
IUUC-Psi-093007 Pelodiscus sinensis 79.71 0.00e+00 2066.00
IUUC-Ppa-095213 Physcomitrella patens 41.05 0.00e+00 712.00
IUUC-Pfo-096802 Poecilia formosa 85.15 0.00e+00 2527.00
IUUC-Pab-098174 Pongo abelii 68.76 0.00e+00 2011.00
IUUC-Pca-100559 Procavia capensis 76.43 0.00e+00 1948.00
IUUC-Rno-105378 Rattus norvegicus 77.28 0.00e+00 2528.00
IUUC-Smo-108946 Selaginella moellendorffii 38.90 4.00e-161 563.00
IUUC-Ssc-115751 Sus scrofa 71.37 0.00e+00 2184.00
IUUC-Tgu-116779 Taeniopygia guttata 76.48 0.00e+00 2198.00
IUUC-Tru-117597 Takifugu rubripes 80.70 0.00e+00 2728.00
IUUC-Ttr-128301 Tursiops truncatus 77.57 0.00e+00 2527.00
IUUC-Vvi-130849 Vitis vinifera 43.07 0.00e+00 729.00
IUUC-Xtr-132668 Xenopus tropicalis 72.91 0.00e+00 2453.00
Created Date 25-Jun-2017

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