iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044043

UUCD1 version

UUC-GlM-01386

Ensembl Protein ID

GLYMA07G31130.3

UniProt Accession

K7L2M9; K7L2M9_SOYBN

Protein Name

Katanin p80 WD40 repeat-containing subunit B1 homolog

Gene Name

LOC100793611

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA07G31130	GLYMA07G31130.3	GLYMA07G31130.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.10e-29	100.4	90	128
UBD/Beta-Prp	3.80e-46	159.3	2	202

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+ +++ ++f +d + +vsG+ D+++kvWDl+ g+ll+
   Q: 90   GHSQGISTIKFsPDgRWVVSGGFDNVVKVWDLTGGKLLH 128
           8***********99999****************999876 PP

UBD/Beta-Prp

   S: 46   rslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgv 139
           +sl gh++ v +v+f++ + + ++g++ ++ik+wdl+  k+v+tl+gh+++ ++++f+p g++++sGs+d  +++wd++++ c++ t +gh++ 
   Q: 2    QSLCGHTSSVESVTFDSAEVLVLSGASSGVIKLWDLEEAKMVRTLTGHKSNCTAVEFHPFGEFFASGSSDTNLNIWDIRKKGCIQ-TYKGHSQG 94
           7899**************9999**************************************************************9.******** PP
   S: 140  vncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspn 233
           +++++++pdg+ +vsG+ D++v++Wdl  gkll++++  h++ ++sl+f++  + +++gs d+tvk+wdl+t e + + +     v+s++f+p+
   Q: 95   ISTIKFSPDGRWVVSGGFDNVVKVWDLTGGKLLHDFKF-HKGHIRSLDFHPLEFLMATGSADRTVKFWDLETFELIGSTRHEVLGVRSIAFHPD 187
           ************************************99.*****************************************************99 PP
   S: 234  derlvsgssDgsiriW 249
           +  l  g +D s++++
   Q: 188  GRTLFAGLED-SLKVY 202
           8888877544.55554 PP

Organism

Glycine max

Functional Description
(View)

May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.

Protein Sequence
(Fasta)

MQSLCGHTSS VESVTFDSAE VLVLSGASSG VIKLWDLEEA KMVRTLTGHK SNCTAVEFHP 60
FGEFFASGSS DTNLNIWDIR KKGCIQTYKG HSQGISTIKF SPDGRWVVSG GFDNVVKVWD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGAGTT TGTGTGGTCA TACTAGTTCA GTAGAATCAG TGACTTTTGA CTCTGCAGAA 60
GTGTTGGTTC TTTCTGGAGC ATCGTCAGGG GTAATAAAGC TTTGGGATTT GGAAGAAGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-0493--Microtubule
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR026962--Katanin_bsu1
IPR028021--Katanin_C-terminal
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF13925--Katanin_con80
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0008352--C:katanin complex
GO:0005874--C:microtubule
GO:0051013--P:microtubule severing

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence