iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057922

Ensembl Protein ID

AET05549

UniProt Accession

Q1SN19; Q1SN19_MEDTR

Genbank Protein ID

ABE80134.1; AET05549.1

Protein Name

Transducin/WD40 repeat protein; WD40-like

Genbank Nucleotide ID

AC139526; CM001224

Gene Name

MTR_8g106820; MtrDRAFT_AC139526g3v2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g106820	AET05549	AET05549

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-29	101.8	233	266
UBD/Beta-Prp	8.10e-59	200.7	56	276

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gHt+s++++++ +d + +++ s D++ kvWD+++
   Q: 233  GHTGSIYAVSWsPDgKQVLTVSADKSAKVWDISE 266
           8***********999****************765 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseD....rtikvwdlstgkcvhtlkghedsvlslsf 102
           g+h  + t+  fsp+++++a++  +gt+++w ++++ +l++     ++ + ++++spdg i++ +s       +++ +  ++g+ v  + gh+++vls+++
   Q: 56   GEHAYPATVARFSPNGEWVASADVSGTVRIWGTRNEFVLKKEfRVLSGRIDDLQWSPDG-IRIVASGEakgnSFVRAFMWDSGTNVGEFDGHSRRVLSCAY 155
           678889999***************************997776699*************9.6666665558899**************************** PP
   S: 103  spsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tgghtdsvyslsfdsngkelvsgsl 200
            p++  ++v+ ++d  ++ ++ +     +   + h+ +vncv+++pdg+ +v+ s D++  ++d ktg+ + +l  +gght+s+y +s++++gk+++++s 
   Q: 156  KPTRpFRIVTCGEDFLVNFYEGPPFRFKQ-SHRDHSNFVNCVRYSPDGSKFVTVSSDKKGIIFDGKTGEKIGELssEGGHTGSIYAVSWSPDGKQVLTVSA 255
           **99899******************9999.********************************************99999********************** PP
   S: 201  dgtvklwdlq...tgecvrtl 218
           d++ k+wd++    g++ +tl
   Q: 256  DKSAKVWDISednIGKVKKTL 276
           *********955544445555 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSAVELTETY ACTPSTERGR GILISGDSKS NTITYTNARS VIMMNLHNPL QVSVYGEHAY 60
PATVARFSPN GEWVASADVS GTVRIWGTRN EFVLKKEFRV LSGRIDDLQW SPDGIRIVAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTTTTTTA CTAGAGGAGC TAGTAGTAGT AGATTTGTGG AAATGGCGTT ACTTGTCGTT 60
GATTGAAAAA GCATAAGCTT TTGAGTATTC ATTCTCTTCT GCCATCATCA TCGTGCACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

mtr:MTR_8g106820

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000457	Aegilops tauschii	68.69	0.00e+00	745.00
IUUC-Aml-002368	Ailuropoda melanoleuca	35.45	4.00e-107	381.00
IUUC-Atr-003160	Amborella trichopoda	73.97	0.00e+00	955.00
IUUC-Apl-004012	Anas platyrhynchos	36.39	4.00e-108	384.00
IUUC-Aca-004707	Anolis carolinensis	35.47	6.00e-110	390.00
IUUC-Aly-006465	Arabidopsis lyrata	75.49	0.00e+00	945.00
IUUC-Ath-006740	Arabidopsis thaliana	75.16	0.00e+00	942.00
IUUC-Bta-013278	Bos taurus	35.90	2.00e-110	392.00
IUUC-Bdi-014659	Brachypodium distachyon	66.28	0.00e+00	862.00
IUUC-Bra-017139	Brassica rapa	75.33	0.00e+00	948.00
IUUC-Cel-018417	Caenorhabditis elegans	32.79	8.00e-88	317.00
IUUC-Cja-019952	Callithrix jacchus	36.17	4.00e-104	371.00
IUUC-Cfa-020225	Canis familiaris	35.52	3.00e-108	385.00
IUUC-Cpo-021900	Cavia porcellus	36.35	2.00e-105	375.00
IUUC-Csa-023028	Chlorocebus sabaeus	36.33	2.00e-105	375.00
IUUC-Csv-025986	Ciona savignyi	27.72	2.00e-54	206.00
IUUC-Dno-029383	Dasypus novemcinctus	35.52	2.00e-104	372.00
IUUC-Dor-030633	Dipodomys ordii	35.79	4.00e-98	351.00
IUUC-Ete-032780	Echinops telfairi	33.67	1.00e-94	340.00
IUUC-Eca-034306	Equus caballus	35.36	2.00e-104	372.00
IUUC-Fca-036301	Felis catus	36.51	2.00e-110	392.00
IUUC-Gmo-039238	Gadus morhua	35.90	2.00e-102	366.00
IUUC-Gga-040235	Gallus gallus	35.89	1.00e-107	382.00
IUUC-Gma-043218	Glycine max	89.46	0.00e+00	1129.00
IUUC-Ggo-044632	Gorilla gorilla	35.61	9.00e-102	363.00
IUUC-Hsa-045792	Homo sapiens	36.33	1.00e-108	386.00
IUUC-Hvu-047517	Hordeum vulgare	67.60	0.00e+00	898.00
IUUC-Lpe-051306	Leersia perrieri	69.36	0.00e+00	919.00
IUUC-Loc-052096	Lepisosteus oculatus	34.62	2.00e-92	332.00
IUUC-Laf-054060	Loxodonta africana	35.53	2.00e-105	376.00
IUUC-Mcc-055619	Macaca mulatta	35.78	5.00e-102	364.00
IUUC-Mla-059103	Melampsora laricipopulina	30.18	1.00e-65	243.00
IUUC-Mga-060150	Meleagris gallopavo	36.11	8.00e-108	383.00
IUUC-Mvi-060448	Microbotryum violaceum	28.94	3.00e-67	249.00
IUUC-Mmr-061226	Microcebus murinus	35.80	5.00e-104	370.00
IUUC-Mmu-064170	Mus musculus	35.84	2.00e-106	379.00
IUUC-Mac-065124	Musa acuminata	73.43	0.00e+00	951.00
IUUC-Mpu-066001	Mustela putorius furo	34.91	7.00e-104	370.00
IUUC-Mlu-067253	Myotis lucifugus	35.42	2.00e-103	369.00
IUUC-Nle-070115	Nomascus leucogenys	35.54	2.00e-96	345.00
IUUC-Oan-073594	Ornithorhynchus anatinus	30.72	2.00e-30	125.00
IUUC-Oba-075010	Oryza barthii	68.37	0.00e+00	907.00
IUUC-Obr-076364	Oryza brachyantha	69.52	0.00e+00	914.00
IUUC-Ogl-077019	Oryza glaberrima	68.37	0.00e+00	907.00
IUUC-Ogu-078496	Oryza glumaepatula	68.37	0.00e+00	907.00
IUUC-Oin-080116	Oryza indica	68.20	0.00e+00	905.00
IUUC-Olo-080290	Oryza longistaminata	68.53	0.00e+00	910.00
IUUC-Ome-081969	Oryza meridionalis	68.20	0.00e+00	905.00
IUUC-Oni-082075	Oryza nivara	68.37	0.00e+00	908.00
IUUC-Opu-083959	Oryza punctata	69.26	0.00e+00	909.00
IUUC-Oru-084711	Oryza rufipogon	68.37	0.00e+00	907.00
IUUC-Osa-085958	Oryza sativa	68.20	0.00e+00	905.00
IUUC-Oga-089108	Otolemur garnettii	35.33	6.00e-107	380.00
IUUC-Oar-089986	Ovis aries	33.55	2.00e-97	349.00
IUUC-Ptr-091281	Pan troglodytes	36.51	1.00e-108	386.00
IUUC-Pan-092585	Papio anubis	36.33	1.00e-105	376.00
IUUC-Pma-094396	Petromyzon marinus	36.60	7.00e-110	390.00
IUUC-Ppa-095876	Physcomitrella patens	57.76	0.00e+00	747.00
IUUC-Pab-098391	Pongo abelii	36.33	2.00e-105	375.00
IUUC-Pop-098850	Populus trichocarpa	80.36	0.00e+00	1026.00
IUUC-Ppe-101578	Prunus persica	80.69	0.00e+00	1033.00
IUUC-Pva-102872	Pteropus vampyrus	34.63	1.00e-102	366.00
IUUC-Pgr-103593	Puccinia graminis	30.98	2.00e-68	253.00
IUUC-Rno-105737	Rattus norvegicus	35.52	1.00e-109	389.00
IUUC-Sha-107084	Sarcophilus harrisii	35.50	1.00e-90	326.00
IUUC-Spo-108309	Schizosaccharomyces pombe	33.61	3.00e-84	305.00
IUUC-Smo-109255	Selaginella moellendorffii	52.05	0.00e+00	644.00
IUUC-Sit-109962	Setaria italica	69.42	0.00e+00	912.00
IUUC-Sly-110897	Solanum lycopersicum	78.88	0.00e+00	1005.00
IUUC-Stu-111971	Solanum tuberosum	78.88	0.00e+00	1005.00
IUUC-Sar-113415	Sorex araneus	45.11	9.00e-30	124.00
IUUC-Sbi-114857	Sorghum bicolor	69.26	0.00e+00	905.00
IUUC-Tca-121609	Theobroma cacao	79.07	0.00e+00	1019.00
IUUC-Tae-123530	Triticum aestivum	68.15	0.00e+00	900.00
IUUC-Tur-126845	Triticum urartu	62.71	0.00e+00	719.00
IUUC-Tbe-127526	Tupaia belangeri	34.53	2.00e-104	372.00
IUUC-Ttr-128898	Tursiops truncatus	33.72	3.00e-95	342.00
IUUC-Vvi-131217	Vitis vinifera	82.51	0.00e+00	1028.00
IUUC-Xtr-132860	Xenopus tropicalis	34.03	9.00e-95	340.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence