iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099464

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_672705; POPTR_0001s23810g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s23810	POPTR_0001s23810.1	POPTR_0001s23810.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-06	29.5	109	150

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C++ f  + + + lpC H++h  C+  w       s++ +CPlCr
   Q: 109  CAVCKDQFliDVEAKQLPCSHLYHPGCILPW------LSNHNSCPLCR 150
           ********98444789***************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSSTPTNEWQ TYWCHECDLS IHLLTTTTPL CPHCHHDFLE LMDPIPTSTA ADTTTFLLDS 60
PSFLNFLQHL NTNSHCDCED DNINATIDSI IPTIKITSCM LEMDPMLVCA VCKDQFLIDV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCCCCACT CCCTTCTTTC CTCTTTTTTA TTACCCCATT ATTGTTCAGG GAATCAGCCT 60
AGCCAAGAAG AGATTACAAC GCCAGAAGCT AAGTCACACT GATCAGAGCA ACAAAAAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s23810g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005837	Arabidopsis lyrata	37.76	1.00e-24	106.00
IUUC-Ath-007519	Arabidopsis thaliana	37.00	6.00e-22	97.40
IUUC-Bol-016348	Brassica oleracea	38.89	3.00e-22	98.20
IUUC-Bra-017044	Brassica rapa	37.57	8.00e-20	90.10
IUUC-Gma-043302	Glycine max	44.22	9.00e-18	82.80
IUUC-Stu-112438	Solanum tuberosum	46.90	1.00e-24	105.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence