iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005611

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348719

Gene Name

ARALYDRAFT_916428

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_704170.1	scaffold_704170.1	scaffold_704170.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.40e-08	34.5	169	209

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C++Cl+d+  +++ +++ C H+fh++C++ w        ++ +CP+C
   Q: 169  CPTCLDDYtpENPKIITKCSHHFHLSCIYEW------MERSETCPVC 209
           ********8777556799*************......********** PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGAFCCCFQV DLFESYVNPN TSMTGNCPCV NCFLQSFVDL YASLFNRGGM HPIPSTVETA 60
TVMNSTTALD DSLSSVYHSP PTPLPYDADP RYFRFVKGSG HSGEESEPLR GDTEMSSESL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAGTTTTGA TTTTGAAGAT ATGGGTGCTT TCTGTTGTTG CTTTCAAGTT GATCTCTTTG 60
AGAGTTATGT CAATCCAAAC ACTTCAATGA CTGGGAACTG TCCTTGCGTA AATTGCTTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_916428

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006595	Arabidopsis thaliana	92.31	1.00e-116	412.00
IUUC-Bol-016593	Brassica oleracea	80.73	2.00e-94	337.00
IUUC-Bra-018045	Brassica rapa	80.75	3.00e-94	336.00
IUUC-Gma-043590	Glycine max	58.85	2.00e-77	280.00
IUUC-Hvu-047810	Hordeum vulgare	40.64	3.00e-43	167.00
IUUC-Ppa-095246	Physcomitrella patens	39.09	2.00e-38	151.00
IUUC-Pop-099578	Populus trichocarpa	53.98	2.00e-62	231.00
IUUC-Sit-110241	Setaria italica	42.15	2.00e-41	161.00
IUUC-Sbi-114816	Sorghum bicolor	40.44	1.00e-37	149.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence