iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114870

UUCD1 version

UUC-SoB-01552

Ensembl Protein ID

Sb01g005570.1

UniProt Accession

A0A1B6QHI5; A0A1B6QHI5_SORBI

Genbank Protein ID

KXG37384.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G061500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g005570	Sb01g005570.1	Sb01g005570.1
Sb01g005570	Sb01g005570.2	Sb01g005570.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.30e-53	181.3	8	143

Active Site

Position(s)	Description	Evidence
88	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekWspal 96
           Rl++++k+l++dpp+gis  p+d+ +++ w+++i+Gp+dtp++gg+Fkl+++f+edYP kPP+v+f++++fhPn+y++G++Cl+il+  ++Wsp +
   Q: 8    RLMRDFKRLQQDPPAGISGAPHDN-NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQWSPIY 100
           9***********************.9************************************************************9..******* PP
   S: 97   svesvllsiqsllaepnpesplneeaaellkknreeykkkvre 139
           +v+ +l+siqsll++pnp+sp+n+eaa+++++n++ey++kvre
   Q: 101  DVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRKVRE 143
           ****************************************985 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSTPARKRLM RDFKRLQQDP PAGISGAPHD NNIMLWNAVI FGPDDTPWDG GTFKLTLQFT 60
EDYPNKPPTV RFVSRMFHPN IYADGSICLD ILQNQWSPIY DVAAILTSIQ SLLCDPNPNS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCACCTGCC CGCCTCTCGC TCCGAAGCTT CTCTCCTCTC GCGTCTCGTA CCAGGAGGAA 60
GGGGGACGGG AGAGACCCAG GGAGCGGAGG CGTGCGAAGC TCGCTTCGCG TGCGCGTGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002862	Amborella trichopoda	97.37	3.00e-87	312.00
IUUC-Aly-006336	Arabidopsis lyrata	96.71	2.00e-78	283.00
IUUC-Ath-007547	Arabidopsis thaliana	96.71	2.00e-78	283.00
IUUC-Bol-016245	Brassica oleracea	97.37	1.00e-87	314.00
IUUC-Bra-018026	Brassica rapa	97.37	1.00e-87	314.00
IUUC-Cin-025537	Ciona intestinalis	71.33	1.00e-55	207.00
IUUC-Csv-025846	Ciona savignyi	70.39	2.00e-59	220.00
IUUC-Gma-043409	Glycine max	98.68	3.00e-88	316.00
IUUC-Mac-065428	Musa acuminata	98.68	2.00e-89	320.00
IUUC-Pma-094376	Petromyzon marinus	79.87	3.00e-72	262.00
IUUC-Pop-099517	Populus trichocarpa	98.03	7.00e-88	314.00
IUUC-Ppe-101949	Prunus persica	98.03	1.00e-87	314.00
IUUC-Smo-109036	Selaginella moellendorffii	93.42	4.00e-85	305.00
IUUC-Sly-111217	Solanum lycopersicum	98.03	5.00e-88	315.00
IUUC-Tae-124461	Triticum aestivum	98.68	4.00e-89	319.00
IUUC-Tur-126866	Triticum urartu	98.03	3.00e-88	315.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence