iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Loc-051778

Ensembl Protein ID

ENSLOCP00000008112.1

UniProt Accession

W5MIA3; W5MIA3_LEPOC

Genbank Protein ID

ENSLOCP00000008112

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AHAT01020931

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLOCG00000006715.1	ENSLOCT00000008122.1	ENSLOCP00000008112.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-06	28.3	294	324

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gHt++++  a+ +d t l+++s+Dg ik W 
   Q: 294  GHTERISEGALsPDgTVLATASHDGYIKFWQ 324
           677777776788899***************6 PP

Organism

Lepisosteus oculatus

Protein Sequence
(Fasta)

MASNSNIDIE DATQHLRDIL KLARPGISDT SSTENPKRSF NGELNGLFGA DFVAAGDRAT 60
LGEPTAHNPE SMSSHERQTI CLSGDDSSTC IVISSGDVEV VASHDSSINS KARGSNKVKI 120

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Nucleotide Sequence
(Fasta)

ATGGCTTCTA ACTCCAATAT AGATATAGAG GACGCGACCC AGCATCTTCG GGACATCTTG 60
AAGCTGGCCC GACCCGGGAT TAGCGGTGAG TGCCGTGGGG AGGCGAGCCG GGAGAGGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032401--EDC4_WD40
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF16529--Ge1_WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000781	Aegilops tauschii	23.21	7.00e-24	106.00
IUUC-Atr-002815	Amborella trichopoda	22.90	5.00e-23	103.00
IUUC-Aly-005827	Arabidopsis lyrata	25.68	3.00e-22	101.00
IUUC-Ath-006603	Arabidopsis thaliana	27.51	5.00e-22	100.00
IUUC-Bdi-014578	Brachypodium distachyon	26.26	1.00e-20	95.90
IUUC-Bol-015150	Brassica oleracea	24.77	1.00e-25	112.00
IUUC-Bra-017673	Brassica rapa	25.06	2.00e-25	111.00
IUUC-Gma-044374	Glycine max	26.93	1.00e-23	105.00
IUUC-Hvu-047656	Hordeum vulgare	26.63	3.00e-22	101.00
IUUC-Lpe-051585	Leersia perrieri	25.20	1.00e-20	95.90
IUUC-Mtr-057751	Medicago truncatula	27.03	2.00e-20	95.10
IUUC-Mac-064800	Musa acuminata	25.81	4.00e-19	90.90
IUUC-Oba-075599	Oryza barthii	26.70	5.00e-22	100.00
IUUC-Obr-076430	Oryza brachyantha	26.13	1.00e-22	102.00
IUUC-Ogl-077923	Oryza glaberrima	26.70	4.00e-22	100.00
IUUC-Ogu-079010	Oryza glumaepatula	26.70	7.00e-22	100.00
IUUC-Oin-079723	Oryza indica	26.70	3.00e-22	100.00
IUUC-Olo-080788	Oryza longistaminata	26.75	5.00e-22	100.00
IUUC-Ome-081610	Oryza meridionalis	26.70	7.00e-22	100.00
IUUC-Oni-082533	Oryza nivara	26.70	6.00e-22	100.00
IUUC-Opu-084175	Oryza punctata	25.70	1.00e-21	99.80
IUUC-Oru-084729	Oryza rufipogon	26.70	7.00e-22	100.00
IUUC-Osa-086170	Oryza sativa	26.70	4.00e-22	100.00
IUUC-Ppa-095435	Physcomitrella patens	24.83	4.00e-19	90.90
IUUC-Pop-099921	Populus trichocarpa	25.93	3.00e-21	98.20
IUUC-Ppe-101310	Prunus persica	21.58	6.00e-12	66.60
IUUC-Sit-110590	Setaria italica	26.21	1.00e-22	102.00
IUUC-Sly-111460	Solanum lycopersicum	26.61	2.00e-23	105.00
IUUC-Sbi-114653	Sorghum bicolor	25.24	8.00e-20	93.20
IUUC-Tca-121694	Theobroma cacao	26.06	1.00e-25	112.00
IUUC-Tae-125553	Triticum aestivum	23.21	4.00e-24	107.00
IUUC-Tur-126244	Triticum urartu	25.82	4.00e-21	97.40
IUUC-Vvi-131361	Vitis vinifera	24.74	3.00e-22	101.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence