iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015599

Ensembl Protein ID

Bo1g147370.1

UniProt Accession

A0A0D3AF56; A0A0D3AF56_BRAOL

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo1g147370	Bo1g147370.1	Bo1g147370.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.30e-30	105.1	74	146

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +peef+Cp+s+elMrdPvvl+sG+tyd+  I+kwl+sg++tcP+t+q l+++ l+Pnl + ++i++wc++ ++
   Q: 74   CPEEFRCPLSKELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLSHTGLTPNLLISDMISKWCKKVGV 146
           79******************************************************************99875 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MAKTEFFDSD PTVIAKTKEL KREMKKLLRT IEEDDDLSVQ TIDQLQETLS DFKRATIKKM 60
AKSSSLEMLE TVSCPEEFRC PLSKELMRDP VVLASGQTYD KLFIQKWLSS GNRTCPKTQQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAAAGA CCGAATTTTT CGATTCGGAT CCAACGGTAA TTGCAAAGAC GAAGGAGCTG 60
AAGCGCGAGA TGAAGAAACT GCTTCGGACC ATCGAGGAAG ACGATGATTT AAGCGTTCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bra-017223	Brassica rapa	97.12	0.00e+00	869.00
IUUC-Gma-043804	Glycine max	59.78	3.00e-146	511.00
IUUC-Mtr-057877	Medicago truncatula	56.74	4.00e-140	490.00
IUUC-Pop-099806	Populus trichocarpa	63.20	3.00e-163	567.00
IUUC-Ppe-101662	Prunus persica	61.52	1.00e-157	548.00
IUUC-Sly-110911	Solanum lycopersicum	59.61	9.00e-156	542.00
IUUC-Stu-112732	Solanum tuberosum	60.04	9.00e-155	539.00
IUUC-Tca-121080	Theobroma cacao	63.79	4.00e-167	580.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence