iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl d+  ++ +  +p CgH+fh +C+  w         + +CPlCr
   Q: 111  CSVCLGDYqaEEKLQQMPsCGHTFHMECIDLW------LTSHTTCPLCR 153
           9*******65332555558*************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MSYSDPNQNP IPETYAPSNS TESEKLKLYQ AFIFSVPICF TFIVLFVLYV IYLRRNSTTN 60
VDWSSLGMRG GTFVPTNNNL STAELGLSKD IREMLPVVIY KESFIVKDSQ CSVCLGDYQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGACATCTTC TCATAAAATA AATAAATAGC TATCACAATT TGATAGCACC TGAATACTTC 60
ACCTGAAACT TTCCCCACCT CTCTCTCTCA TCTTATCTAT CACCATTGCT TCATCTCCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0016740--F:transferase activity
GO:0008270--F:zinc ion binding
GO:0016567--P:protein ubiquitination

KEGG

ath:AT4G10150

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005500	Arabidopsis lyrata	91.14	6.00e-127	445.00
IUUC-Afl-008676	Aspergillus flavus	52.00	2.00e-12	67.80
IUUC-Bdi-014087	Brachypodium distachyon	43.75	3.00e-40	157.00
IUUC-Bol-016221	Brassica oleracea	62.84	4.00e-69	253.00
IUUC-Bra-017017	Brassica rapa	70.92	4.00e-57	212.00
IUUC-Gma-043458	Glycine max	56.20	4.00e-36	143.00
IUUC-Lpe-051002	Leersia perrieri	41.89	4.00e-40	157.00
IUUC-Mtr-058067	Medicago truncatula	50.85	2.00e-41	161.00
IUUC-Mac-065514	Musa acuminata	40.35	5.00e-39	153.00
IUUC-Oba-075393	Oryza barthii	41.18	3.00e-39	154.00
IUUC-Obr-076149	Oryza brachyantha	42.79	5.00e-41	160.00
IUUC-Ogl-077140	Oryza glaberrima	41.18	3.00e-39	154.00
IUUC-Ogu-078926	Oryza glumaepatula	41.18	3.00e-39	154.00
IUUC-Ome-081399	Oryza meridionalis	47.13	3.00e-39	154.00
IUUC-Oni-082750	Oryza nivara	41.18	4.00e-39	154.00
IUUC-Opu-083446	Oryza punctata	47.13	3.00e-39	154.00
IUUC-Oru-084873	Oryza rufipogon	41.18	3.00e-39	154.00
IUUC-Osa-085898	Oryza sativa	41.18	3.00e-39	154.00
IUUC-Pop-099279	Populus trichocarpa	43.32	7.00e-27	113.00
IUUC-Ppe-101232	Prunus persica	46.67	1.00e-37	149.00
IUUC-Smo-109572	Selaginella moellendorffii	40.14	3.00e-26	110.00
IUUC-Sit-110610	Setaria italica	47.65	1.00e-38	152.00
IUUC-Sly-111610	Solanum lycopersicum	58.75	3.00e-44	171.00
IUUC-Stu-112875	Solanum tuberosum	58.12	5.00e-44	170.00
IUUC-Sbi-114101	Sorghum bicolor	50.00	1.00e-39	155.00
IUUC-Tca-121298	Theobroma cacao	50.98	3.00e-46	178.00
IUUC-Tae-124847	Triticum aestivum	52.63	4.00e-38	150.00
IUUC-Tur-126109	Triticum urartu	45.45	8.00e-38	149.00
IUUC-Vvi-131331	Vitis vinifera	44.50	2.00e-42	164.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence