iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099960

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000346

Gene Name

POPTRDRAFT_229179; POPTR_0010s01400g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s01400	POPTR_0010s01400.1	POPTR_0010s01400.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.90e-07	30.4	111	153

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f   ++  ++lp C+H fh  C+ +w         + +CPlCr
   Q: 111  CAVCLSEFqenET-GRTLPkCNHSFHIGCIDMW------FHSHSTCPLCR 153
           ********76433.677788*************......9999******8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDSDLGDPPK EYREGFALSG KIMLSAVVIL FLVIILMVCL HFYARWYLIR ARRRHIRHAR 60
NRRNHLVFYV DSAHNPTIVT TQVTRGLEET VLKSLPVFVY SEKTHQDSME CAVCLSEFQE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACTCGG ACTTGGGAGA TCCACCAAAG GAATATAGAG AAGGCTTTGC ATTAAGTGGC 60
AAGATAATGC TAAGTGCTGT TGTTATTCTT TTCCTTGTTA TCATTTTAAT GGTTTGTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0010s01400g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000183	Aegilops tauschii	48.81	1.00e-18	86.30
IUUC-Gma-043514	Glycine max	52.76	3.00e-37	148.00
IUUC-Mtr-058446	Medicago truncatula	51.34	4.00e-43	167.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence