iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113821

UUCD1 version

UUC-SoB-01412

Ensembl Protein ID

Sb10g030800.1

UniProt Accession

A0A194YMX5; A0A194YMX5_SORBI

Genbank Protein ID

KXG20946.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G274100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g030800	Sb10g030800.1	Sb10g030800.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.00e-31	109.6	152	224

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p eflCpIsle+M+dPv+++sG ty+r+sI+kwl+ g++tcP+t+qpl++ +l Pn ++++li +wce n +
   Q: 152  IPNEFLCPISLEIMTDPVIIASGRTYERRSIQKWLDAGQRTCPKTQQPLAHLSLAPNFAVKNLILQWCENNTV 224
           89*******************************************************************9976 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MLGRFRAVYE KMNLALDGMP YSEIGISDEV KEQVELINAQ LKRCKKRSDT QDMELSMDFM 60
MILENKEDGN ADRAILERLA KKLELQSLAD LRAETMAIKK LINERNGQQP ESTKHIIELL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTTGGGC GGTTCAGGGC CGTGTATGAG AAGATGAATC TTGCATTGGA TGGGATGCCT 60
TACTCTGAGA TTGGCATCTC CGATGAAGTC AAGGAACAGG TAATATAGGC GTTATGTCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-042825	Glycine max	60.12	9.00e-175	605.00
IUUC-Mac-064853	Musa acuminata	55.49	4.00e-164	570.00
IUUC-Obr-076853	Oryza brachyantha	76.25	0.00e+00	779.00
IUUC-Opu-083836	Oryza punctata	78.44	0.00e+00	816.00
IUUC-Sit-110533	Setaria italica	91.15	0.00e+00	956.00
IUUC-Tur-126004	Triticum urartu	79.77	0.00e+00	844.00
IUUC-Vvi-131187	Vitis vinifera	60.89	0.00e+00	639.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence