iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005538

UUCD1 version

UUC-ArL-00694

Ensembl Protein ID

fgenesh2_kg.6__183__AT5G02750.1

UniProt Accession

D7M7V8; D7M7V8_ARALL

Genbank Protein ID

EFH47246.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348718

Gene Name

ARALYDRAFT_487049

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.6__183__AT5G02750.1	fgenesh2_kg.6__183__AT5G02750.1	fgenesh2_kg.6__183__AT5G02750.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.90e-09	37.3	214	255

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+e++   +d ++ +pC+Hvfh +C+  w       sk+ +CP Cr
   Q: 214  CVICKEEMsegRD-VCEMPCQHVFHWKCILPW------LSKKNTCPFCR 255
           ********66444.******************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEEGNITIIM ASLSTLSPSH LTNLTHSILS ISHHHRRRLA TVLSSPTLFS LTLRHLLSLS 60
LPDKTHLIAN HLLSLLHPLL IHRKHHSSST VTMKLRDLDA VVLLLFLCET HQLHPDVLEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATATGGAGG AAGGAAACAT CACAATCATC ATGGCGTCAC TCTCTACTCT TTCTCCTTCA 60
CACCTCACAA ATCTCACTCA TTCCATTCTC TCAATCTCCC ACCACCATCG CCGCCGCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0009501--C:amyloplast
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0009630--P:gravitropism

KEGG

aly:ARALYDRAFT_487049

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002887	Amborella trichopoda	29.43	5.00e-20	90.90
IUUC-Ath-006921	Arabidopsis thaliana	95.05	7.00e-119	419.00
IUUC-Bdi-014905	Brachypodium distachyon	48.48	1.00e-17	82.80
IUUC-Bol-016141	Brassica oleracea	82.11	1.00e-86	312.00
IUUC-Bra-017782	Brassica rapa	86.60	1.00e-87	315.00
IUUC-Gma-043966	Glycine max	50.35	4.00e-50	190.00
IUUC-Lpe-051463	Leersia perrieri	33.96	3.00e-22	97.80
IUUC-Mac-065543	Musa acuminata	38.58	3.00e-27	114.00
IUUC-Oba-075686	Oryza barthii	31.01	1.00e-17	82.40
IUUC-Ogu-078394	Oryza glumaepatula	31.01	1.00e-17	82.40
IUUC-Oin-079750	Oryza indica	31.01	5.00e-18	84.30
IUUC-Oni-082513	Oryza nivara	31.01	3.00e-18	84.70
IUUC-Oru-084366	Oryza rufipogon	31.01	2.00e-17	82.00
IUUC-Osa-085930	Oryza sativa	31.01	3.00e-18	85.10
IUUC-Pop-099681	Populus trichocarpa	50.00	2.00e-46	178.00
IUUC-Sly-111812	Solanum lycopersicum	47.35	1.00e-48	185.00
IUUC-Stu-112332	Solanum tuberosum	45.92	3.00e-46	177.00
IUUC-Sbi-114490	Sorghum bicolor	47.06	9.00e-16	76.60
IUUC-Tca-121044	Theobroma cacao	53.97	2.00e-48	184.00
IUUC-Vvi-131513	Vitis vinifera	48.10	1.00e-46	179.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence