iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-120916

Ensembl Protein ID

EOY22705

UniProt Accession

A0A061FYY2; A0A061FYY2_THECC

Genbank Protein ID

EOY22705.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM001881

Gene Name

TCM_014797

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_014797	EOY22705	EOY22705

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.80e-18	64.6	836	865

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           Htd+v++l++ ++ ++l++G++ + +++W+
   Q: 836  HTDEVCGLKWsTEgNMLATGGNENLLYIWE 865
           **********8779***************8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MVSSFPFLSD ERGMPPYYIV ETLDTKMKVK AAVVTLGLGL ILADLEGFCH GGLISGVGRY 60
EVQTGRRDGL VSSTKNAVSP PPSASVSDTV LLDLGQFFRD NSVISQQTGI RASRSWVNLN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATATATGACA ATAAGCATAG ATGATCTGCG TTTCCAATCA GTGTCACTAT CTGGTAGAGA 60
GAAACGAAGA AGTTGATGGT CTCCTCTTTT CCTTTCTTAT CTGATGAAAG AGGGATGCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001878--Znf_CCHC

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50158--ZF_CCHC

Pfam

PF00400--WD40
PF00098--zf-CCHC

SMART

SM00320--WD40
SM00343--ZnF_C2HC

Gene Ontology

GO:0003676--F:nucleic acid binding
GO:0097027--F:ubiquitin-protein transferase activator activity
GO:0008270--F:zinc ion binding
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043406	Glycine max	63.36	7.00e-178	615.00
IUUC-Mtr-057975	Medicago truncatula	60.26	1.00e-163	568.00
IUUC-Mac-064491	Musa acuminata	54.29	1.00e-122	431.00
IUUC-Pop-099291	Populus trichocarpa	62.36	3.00e-155	540.00
IUUC-Ppe-101170	Prunus persica	63.44	2.00e-159	554.00
IUUC-Sly-111334	Solanum lycopersicum	59.29	1.00e-162	565.00
IUUC-Stu-112271	Solanum tuberosum	58.12	3.00e-162	563.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence