iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058126

Ensembl Protein ID

KEH42796

UniProt Accession

A0A072VMF8; A0A072VMF8_MEDTR

Genbank Protein ID

KEH42796.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g076400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g076400	KEH42796	KEH42796

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.20e-19	69.8	262	331

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           ++ flC I + +M dPv l++G t +rs+Ie w+ +g++t+P t++ l++++l  n+ lr+ i++w+e n
   Q: 262  LKSFLCRINGAVMVDPVSLSTGTTCERSAIESWFYDGNRTDPETQEVLEDTSLRSNIPLRQSIEEWRELN 331
           689***************************************************************9865 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MVGLELIPIG TILTVVTSQV LRTAHAAADV LIGKESFKAL SKYLFDIEPV LKELQLQELN 60
DSQPARVALE SLEADVKRAN NMVEKYKNRG RFYLLVKCRS IVEEVEQVTR DIGRSLAALS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTACTGATT GGTCTGACCA TCTCCACTCT GAACCTTTGT CAAACCGTGT AAAACCTTTC 60
CAAATCAAAC ATTAGAAAAA ATATCAGAAA ATTGCTACAT ACTTTCTTGG TCTTTTCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0016874--F:ligase activity
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

mtr:MTR_1g076400

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002585	Amborella trichopoda	48.61	0.00e+00	862.00
IUUC-Gma-043174	Glycine max	83.25	0.00e+00	1620.00
IUUC-Mac-064921	Musa acuminata	51.75	0.00e+00	896.00
IUUC-Pop-100009	Populus trichocarpa	67.03	0.00e+00	1324.00
IUUC-Ppe-101705	Prunus persica	69.39	0.00e+00	1308.00
IUUC-Smo-109574	Selaginella moellendorffii	36.31	3.00e-155	541.00
IUUC-Sly-111263	Solanum lycopersicum	69.82	1.00e-126	446.00
IUUC-Stu-112918	Solanum tuberosum	59.96	0.00e+00	1196.00
IUUC-Tca-121788	Theobroma cacao	68.89	0.00e+00	1320.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence