iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-111974

Ensembl Protein ID

PGSC0003DMT400066178

UniProt Accession

M1CF54; M1CF54_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400025758	PGSC0003DMT400066178	PGSC0003DMT400066178

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.30e-12	46.5	601	634

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           H + ++ ++f  ++  +++++s D  +k+WDlr+
   Q: 601  HREHINVVKFahHSpSIFATSSFDRDVKLWDLRQ 634
           777789999998444889*************987 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

FSQIGSRYMY SCQARGVPPN KQVLSALFKA KLKKARHEVS SLVILLDDIK DTDFHPLLDL 60
LKEADLSEID AVDIINRSVC ILSWEYLLAL VRVSSRKLRV VDIQDILFGK DFLLDLAQRG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTCTCAAA TTGGGTCCAG GTACATGTAT TCTTGTCAGG CTAGAGGAGT TCCACCTAAT 60
AAACAAGTTC TGTCAGCTCT TTTCAAGGTT TGTGATACTG TAGTTGTCCA GTGTTTACAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032675--L_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0071493--P:cellular response to UV-B

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005966	Arabidopsis lyrata	52.67	0.00e+00	715.00
IUUC-Ath-007257	Arabidopsis thaliana	53.65	0.00e+00	714.00
IUUC-Bta-012914	Bos taurus	24.31	1.00e-11	63.20
IUUC-Bol-016080	Brassica oleracea	54.65	0.00e+00	788.00
IUUC-Bra-017152	Brassica rapa	54.55	0.00e+00	784.00
IUUC-Cpo-022063	Cavia porcellus	25.40	2.00e-13	69.30
IUUC-Cme-027163	Cyanidioschyzon merolae	36.55	3.00e-74	272.00
IUUC-Ete-033038	Echinops telfairi	25.10	2.00e-13	69.30
IUUC-Fca-036095	Felis catus	25.79	2.00e-12	65.90
IUUC-Gma-044343	Glycine max	62.83	0.00e+00	906.00
IUUC-Mtr-057634	Medicago truncatula	59.05	0.00e+00	899.00
IUUC-Mac-065375	Musa acuminata	53.28	0.00e+00	773.00
IUUC-Oar-089826	Ovis aries	24.31	1.00e-11	63.50
IUUC-Ppa-095407	Physcomitrella patens	53.94	4.00e-150	524.00
IUUC-Pop-099267	Populus trichocarpa	63.88	0.00e+00	946.00
IUUC-Ppe-101596	Prunus persica	65.59	0.00e+00	890.00
IUUC-Smo-109318	Selaginella moellendorffii	54.99	2.00e-137	481.00
IUUC-Sly-111655	Solanum lycopersicum	97.17	0.00e+00	1466.00
IUUC-Tca-121812	Theobroma cacao	62.08	0.00e+00	964.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence