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Tag Content
iUUCD ID IUUC-Aly-006096
Ensembl Protein ID fgenesh2_kg.1__1383__AT1G12760.2
UniProt Accession D7KPC2; D7KPC2_ARALL
Genbank Protein ID EFH66224.1
Protein Name Protein binding protein
Genbank Nucleotide ID GL348713
Gene Name ARALYDRAFT_471429
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.1__1383__AT1G12760.2 fgenesh2_kg.1__1383__AT1G12760.2 fgenesh2_kg.1__1383__AT1G12760.2
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/RING 5.10e-08 34.0 280 321
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
    C+iCl+ ++dg ++ lpCgH+fh +C+ kw + +++CPlC+
   Q: 280 CCICLSAYEDGteLRELPCGHHFHCSCVDKW------LYINATCPLCK 321
    ********88744777***************......**********7 PP
   

Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MREPSMLVRE AAAEQLEERQ SDWAYSKPVV VLDIVWNLAF VSVATAILVM SRNEHPIMPL 60
RVWLLGYALQ CVLHMVCVCV EYRRRNRRRT NRTTTTPRSR SSSSSSSSSS LEEDALGSRR 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Aly-006096|E3,RING|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TATTTTTCTG TTAATTTTCC TTAATCATCA TCACCTTCAT GATCATCATC TCTCTCTCTT 60
CTCTTCGTTC CTCTTTCTTT ACACGCTTGA AACCCTAGCA GTTCCAATTT CGTTTTCGCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Aly-006096|E3,RING|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG aly:ARALYDRAFT_471429
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000315 Aegilops tauschii 62.01 3.00e-80 290.00
IUUC-Ath-007048 Arabidopsis thaliana 96.44 2.00e-154 538.00
IUUC-Bol-015152 Brassica oleracea 87.76 2.00e-136 478.00
IUUC-Bra-017355 Brassica rapa 87.46 5.00e-142 496.00
IUUC-Gma-043453 Glycine max 73.73 5.00e-120 423.00
IUUC-Mtr-058719 Medicago truncatula 73.13 4.00e-114 404.00
IUUC-Obr-076817 Oryza brachyantha 60.22 1.00e-79 288.00
IUUC-Ogl-077875 Oryza glaberrima 62.50 8.00e-107 379.00
IUUC-Ogu-078301 Oryza glumaepatula 63.99 2.00e-107 381.00
IUUC-Ome-081780 Oryza meridionalis 64.42 3.00e-108 386.00
IUUC-Oni-082775 Oryza nivara 63.99 5.00e-107 380.00
IUUC-Oru-085043 Oryza rufipogon 63.99 5.00e-107 380.00
IUUC-Olu-087692 Ostreococcus lucimarinus 48.89 2.00e-10 58.20
IUUC-Ppa-095516 Physcomitrella patens 58.28 1.00e-96 345.00
IUUC-Pop-099381 Populus trichocarpa 71.65 9.00e-113 399.00
IUUC-Sit-110742 Setaria italica 64.72 3.00e-107 380.00
IUUC-Tae-125841 Triticum aestivum 63.47 1.00e-105 375.00
Created Date 25-Jun-2017

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