iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrt 32
           H+ +v+ ++    +ll++G +D+++++W+l++
   Q: 117  HSHRVSQCRMkK-GLLLTGVGDKVMRLWSLKS 147
           999999999943.89**************987 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MGRTETGDES SARKMRRKVP TSIESLDADI LCIIFSFLDL FDLVHCTVVC NSWNAVIKRL 60
KLLQASCRKM HHLGSDSPSS STSLDRPAEI DVEDFAMKHH KMALLRGRIE IERWEAHSHR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGAGAA CAGAGACCGG CGACGAATCG TCGGCGAGAA AGATGCGACG TAAAGTACCC 60
ACGTCGATCG AATCTCTAGA CGCCGATATA CTGTGCATCA TCTTCTCTTT TCTTGATTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box

SMART

SM00256--FBOX
SM00320--WD40

KEGG

ath:AT3G52030

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003151	Amborella trichopoda	43.71	2.00e-87	315.00
IUUC-Aly-005690	Arabidopsis lyrata	89.43	0.00e+00	798.00
IUUC-Bdi-014108	Brachypodium distachyon	40.00	1.00e-94	339.00
IUUC-Bol-015377	Brassica oleracea	81.50	0.00e+00	748.00
IUUC-Bra-016934	Brassica rapa	81.74	8.00e-175	605.00
IUUC-Gma-043394	Glycine max	49.66	3.00e-120	424.00
IUUC-Lpe-051613	Leersia perrieri	37.70	3.00e-87	314.00
IUUC-Mtr-057690	Medicago truncatula	47.73	8.00e-114	403.00
IUUC-Mac-064938	Musa acuminata	45.45	2.00e-87	314.00
IUUC-Oba-075418	Oryza barthii	42.34	5.00e-90	323.00
IUUC-Obr-076882	Oryza brachyantha	40.23	2.00e-96	345.00
IUUC-Ogl-077438	Oryza glaberrima	40.37	6.00e-97	347.00
IUUC-Ogu-078943	Oryza glumaepatula	40.60	4.00e-97	347.00
IUUC-Oin-079069	Oryza indica	40.37	1.00e-96	346.00
IUUC-Olo-080409	Oryza longistaminata	37.16	7.00e-82	296.00
IUUC-Oni-083056	Oryza nivara	40.37	1.00e-95	342.00
IUUC-Opu-084172	Oryza punctata	41.20	2.00e-98	352.00
IUUC-Oru-085030	Oryza rufipogon	40.37	1.00e-96	346.00
IUUC-Osa-085520	Oryza sativa	40.37	1.00e-96	346.00
IUUC-Ppa-095450	Physcomitrella patens	24.04	5.00e-35	141.00
IUUC-Pop-099796	Populus trichocarpa	57.38	2.00e-129	454.00
IUUC-Ppe-101252	Prunus persica	52.08	7.00e-121	426.00
IUUC-Smo-109369	Selaginella moellendorffii	29.86	1.00e-32	132.00
IUUC-Sit-109830	Setaria italica	40.33	2.00e-96	345.00
IUUC-Sly-111786	Solanum lycopersicum	49.65	5.00e-110	390.00
IUUC-Sbi-114102	Sorghum bicolor	41.26	2.00e-97	348.00
IUUC-Tca-121562	Theobroma cacao	56.68	2.00e-129	455.00
IUUC-Tae-123446	Triticum aestivum	40.09	4.00e-95	340.00
IUUC-Tur-126707	Triticum urartu	35.27	1.00e-68	253.00
IUUC-Vvi-131441	Vitis vinifera	52.99	8.00e-134	469.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence